RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	CCDC39	Q9UFE4	941 aa		12.02	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RAPGEFL1	Q9UHV5	662 aa		12.02	□□□□□ -0.49
NPIPB4-222	ENST00000614197	BDP1	A6H8Y1	2624 aa		12.02	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CCDC195	A0A1B0GUA6	201 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TTLL13P	A6NNM8	815 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SFI1	A8K8P3	1242 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	LILRB3	O75022	631 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	B3GAT3	O94766	335 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	FAM13A	O94988	1023 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PLA2G5	P39877	138 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	OSTN	P61366	133 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SF3A1	Q15459	793 aa	Known RBP	12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	DCLRE1A	Q6PJP8	1040 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TAS1R1	Q7RTX1	841 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	GLYCTK	Q8IVS8	523 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ZDHHC14	Q8IZN3	488 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KREMEN2	Q8NCW0	462 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	GSTCD	Q8NEC7	633 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CMAS	Q8NFW8	434 aa	Predicted RBP	12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SMG7	Q92540	1137 aa	Known RBP	12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RABGGTA	Q92696	567 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TARS2	Q9BW92	718 aa	Known RBP	12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CDT1	Q9H211	546 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KCNH6	Q9H252	994 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CHST7	Q9NS84	486 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ANKFY1	Q9P2R3	1169 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ODF2L	Q9ULJ1	636 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SORCS3	Q9UPU3	1222 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	USP20	Q9Y2K6	914 aa		12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.01	□□□□□ -0.49
NPIPB4-222	ENST00000614197	C2CD4D	B7Z1M9	353 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PTGES	O14684	152 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CLDN3	O15551	220 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TOM1L1	O75674	476 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KIF4A	O95239	1232 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	HSP90AA1	P07900	732 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	GBP2	P32456	591 aa	Predicted RBP	12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CUL4A	Q13619	759 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PSMD5	Q16401	504 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KYAT1	Q16773	422 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TMEM119	Q4V9L6	283 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	GLRA4	Q5JXX5	417 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ZPBP2	Q6X784	338 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	HFE2	Q6ZVN8	426 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KCNK18	Q7Z418	384 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	BMP8A	Q7Z5Y6	402 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	GPBP1	Q86WP2	473 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RNF168	Q8IYW5	571 aa	Predicted RBP	12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	DAW1	Q8N136	415 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MYCT1	Q8N699	235 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KRI1	Q8N9T8	703 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PIK3R5	Q8WYR1	880 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	B3GALT6	Q96L58	329 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PNMA5	Q96PV4	448 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PRRX2	Q99811	253 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	NTPCR	Q9BSD7	190 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ZDHHC7	Q9NXF8	308 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	LIMD1	Q9UGP4	676 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	NUB1	Q9Y5A7	615 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	XIRP2	A4UGR9	3374 aa		12	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SPTBN5	Q9NRC6	3674 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-222	ENST00000614197		F8W810	466 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	XPOT	O43592	962 aa	Known RBP	11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	XYLB	O75191	536 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SPATA31D3	P0C874	917 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MYB	P10242	640 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	LIG4	P49917	911 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SLC12A3	P55017	1021 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MAPK7	Q13164	816 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PPM1L	Q5SGD2	360 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KANK3	Q6NY19	840 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SPATA31D4	Q6ZUB0	917 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ANKS3	Q6ZW76	656 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	FBXL6	Q8N531	539 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	INTS4	Q96HW7	963 aa	Known RBP	11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RHOBTB2	Q9BYZ6	727 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MFSD1	Q9H3U5	465 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PARVG	Q9HBI0	331 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CDH22	Q9UJ99	828 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ATG2A	Q2TAZ0	1938 aa		11.99	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SMIM28	A0A1B0GU29	152 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TMEM189-UBE2V1	I3L0A0	370 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197		K7ELQ4	463 aa	Predicted RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197		K7ENM7	598 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	HNRNPDL	O14979	420 aa	Known RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TGM5	O43548	720 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	EDN1	P05305	212 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MAPT	P10636	758 aa	Known RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RPL17	P18621	184 aa	Known RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PLCG1	P19174	1290 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RFX1	P22670	979 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ELF1	P32519	619 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RPL9	P32969	192 aa	Known RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CLCNKB	P51801	687 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RTP2	Q5QGT7	225 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	HAUS6	Q7Z4H7	955 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TMEM161B	Q8NDZ6	487 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms