RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 GTPBP6O43824 516 aaPredicted RBP12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 FAM189A1O60320 539 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 FGF18O76093 207 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 PRPF6O94906 941 aaKnown RBP12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 DSC1Q08554 894 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 DPYDQ12882 1025 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 ALCAMQ13740 583 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 CAMK1Q14012 370 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 FAM26FQ5R3K3 315 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 EPM2AIP1Q7L775 607 aaPredicted RBP12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 SPPL3Q8TCT6 385 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 ZNF558Q96NG5 402 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 STYXL1Q9Y6J8 313 aa12.38□□□□□ -0.43
CCL3L3-201ENST00000612839 PDCD11Q14690 1871 aaKnown RBP12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 A0A0B4J269 797 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 NR1I2O75469 434 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 GALTP07902 379 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 DNAJB1P25685 340 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 ADSSP30520 456 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 HOXD13P35453 343 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 MATR3P43243 847 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 ALDH7A1P49419 539 aaKnown RBP12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 GRIK3Q13003 919 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 KMT5BQ4FZB7 885 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 ZBTB41Q5SVQ8 909 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 ALKAL1Q6UXT8 129 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 TMEM173Q86WV6 379 aaPredicted RBP12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 COLGALT2Q8IYK4 626 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 SLC39A11Q8N1S5 342 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 ACAP3Q96P50 834 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 ACCSQ96QU6 501 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 RPS6KC1Q96S38 1066 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 LMCD1Q9NZU5 365 aa12.37□□□□□ -0.43
CCL3L3-201ENST00000612839 ANK1P16157 1881 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 PPM1AP35813 382 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 TNFSF9P41273 254 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 SLC11A1P49279 550 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 PLCB3Q01970 1234 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 NAB2Q15742 525 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 XKR4Q5GH76 650 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 GLRA4Q5JXX5 417 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 CLEC17AQ6ZS10 378 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 ZNF507Q8TCN5 953 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 BCL7CQ8WUZ0 217 aaPredicted RBP12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 SCFD1Q8WVM8 642 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 POF1BQ8WVV4 589 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 RNF166Q96A37 237 aaPredicted RBP12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 MRPL38Q96DV4 380 aaKnown RBP12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 SNX27Q96L92 541 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 MSTO1Q9BUK6 570 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 TOPORSQ9NS56 1045 aaPredicted RBP12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 EXOC7Q9UPT5 735 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 PRUNE2Q8WUY3 3088 aa12.36□□□□□ -0.43
CCL3L3-201ENST00000612839 NRP1O14786 923 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 OGTO15294 1046 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 RPN1P04843 607 aaKnown RBP12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 ALDH2P05091 517 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 THP07101 528 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 CXCL8P10145 99 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 YARSP54577 528 aaKnown RBP12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 UBE3AQ05086 875 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 STK4Q13043 487 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 POSTNQ15063 836 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 PTPROQ16827 1216 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 SLC10A6Q3KNW5 377 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 SLFN12LQ6IEE8 588 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 KIAA0895Q8NCT3 520 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 IGSF21Q96ID5 467 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 TIGD1Q96MW7 591 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 ZMAT2Q96NC0 199 aaKnown RBP12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 LMAN2LQ9H0V9 348 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 EXOC1Q9NV70 894 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 CNTN3Q9P232 1028 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 CACNG4Q9UBN1 327 aa12.35□□□□□ -0.43
CCL3L3-201ENST00000612839 SMIM28A0A1B0GU29 152 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 F8W810 466 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 PRPF40AO75400 957 aaKnown RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 RHOBTB3O94955 611 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CSPG5O95196 566 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CLTAP09496 248 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 IRS1P35568 1242 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 OR1G1P47890 313 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 ACOT2P49753 483 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 ERVFC1P60507 584 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 UBE2HP62256 183 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 PSMD2Q13200 908 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms