RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ACOT2P49753 483 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 SV2AQ7L0J3 742 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 TMEM206Q9H813 350 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 STK24Q9Y6E0 443 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 WNK3Q9BYP7 1800 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 BHMG1C9JSJ3 638 aaPredicted RBP15.02□□□□□ -0.01
COL6A1-207ENST00000612273 GOLGA8SH3BPF8 625 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 GOLGA8MH3BSY2 632 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 ZSCAN5DPP0CG00 497 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 ATF7P17544 494 aaPredicted RBP15.02□□□□□ -0.01
COL6A1-207ENST00000612273 MYO1EQ12965 1108 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 SWT1Q5T5J6 900 aaKnown RBP15.02□□□□□ -0.01
COL6A1-207ENST00000612273 PGM2Q96G03 612 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 WNT8AQ9H1J5 351 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 EHMT1Q9H9B1 1298 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.02□□□□□ -0.01
COL6A1-207ENST00000612273 FZD1Q9UP38 647 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 DIS3Q9Y2L1 958 aaKnown RBP15.02□□□□□ -0.01
COL6A1-207ENST00000612273 RARGP13631 454 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 STX2P32856 288 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 ELF3P78545 371 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-207ENST00000612273 MRPS9P82933 396 aaKnown RBP15.01□□□□□ -0.01
COL6A1-207ENST00000612273 TMED2Q15363 201 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 BTNL9Q6UXG8 535 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 FAM71AQ8IYT1 594 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 SPOCK2Q92563 424 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 STAMBPL1Q96FJ0 436 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 C10orf88Q9H8K7 445 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 QTRT2Q9H974 415 aaKnown RBP15.01□□□□□ -0.01
COL6A1-207ENST00000612273 ANAPC5Q9UJX4 755 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 AHDC1Q5TGY3 1603 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-207ENST00000612273 KLRG2A4D1S0 409 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-207ENST00000612273 AGTP01019 485 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 IFNB1P01574 187 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 CTNNA2P26232 953 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-207ENST00000612273 PPP2R5EQ16537 467 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 TKFCQ3LXA3 575 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 KRT39Q6A163 491 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 C11orf63Q6NUN7 778 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 TAOK1Q7L7X3 1001 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 FAM212AQ96EL1 285 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 CEP170P1Q96L14 293 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 NOD2Q9HC29 1040 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 KMT5AQ9NQR1 393 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 AAASQ9NRG9 546 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 RAB20Q9NX57 234 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 PCYOX1Q9UHG3 505 aa15.01□□□□□ -0.01
COL6A1-207ENST00000612273 C5orf60A6NFR6 353 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 PAEPP09466 180 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 CETPP11597 493 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 ATF2P15336 505 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 NPTX2P47972 431 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 PLCB3Q01970 1234 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 SYCP2LQ5T4T6 812 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 ZNF365Q70YC5 407 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 OGFOD1Q8N543 542 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 PARD3BQ8TEW8 1205 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 BSNDQ8WZ55 320 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 KIF9Q9HAQ2 790 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 SERPINA10Q9UK55 444 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 COL24A1Q17RW2 1714 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 ETS1P14921 441 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 EZRP15311 586 aaKnown RBP15□□□□□ -0.01
COL6A1-207ENST00000612273 RPS6P62753 249 aaKnown RBP15□□□□□ -0.01
COL6A1-207ENST00000612273 SLMAPQ14BN4 828 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 SCARA3Q6AZY7 606 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 FBXL13Q8NEE6 735 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
COL6A1-207ENST00000612273 HOMER3Q9NSC5 361 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 PCDHA3Q9Y5H8 950 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 APBA3O96018 575 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 NAA25Q14CX7 972 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 SIX1Q15475 284 aaPredicted RBP15□□□□□ -0.01
COL6A1-207ENST00000612273 KLHL29Q96CT2 875 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 ECT2Q9H8V3 914 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 PARP2Q9UGN5 583 aa15□□□□□ -0.01
COL6A1-207ENST00000612273 SKAP2O75563 359 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-207ENST00000612273 CDR2Q01850 454 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 GLIS1Q8NBF1 620 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 HELQQ8TDG4 1101 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 KCNV2Q8TDN2 545 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 ART4Q93070 314 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 ZNF668Q96K58 619 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-207ENST00000612273 ANKFY1Q9P2R3 1169 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 ASTN2O75129 1339 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-207ENST00000612273 IGF2BP3O00425 579 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL6A1-207ENST00000612273 SLC26A4O43511 780 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 DMP1Q13316 513 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-207ENST00000612273 C4orf33Q8N1A6 199 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 TGS1Q96RS0 853 aaKnown RBP14.99□□□□□ -0.01
COL6A1-207ENST00000612273 RPS6KC1Q96S38 1066 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 RMDN3Q96TC7 470 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 ZNF70Q9UC06 446 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-207ENST00000612273 GTF3C4Q9UKN8 822 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 TBX20Q9UMR3 447 aa14.99□□□□□ -0.01
COL6A1-207ENST00000612273 WDR91A4D1P6 747 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 DHX15O43143 795 aaKnown RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 SNX3O60493 162 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms