RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 CACNA2D1P54289 1103 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 TMED2Q15363 201 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 SLC10A5Q5PT55 438 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 MEX3CQ5U5Q3 659 aaKnown RBP11.77□□□□□ -0.53
CDH4-202ENST00000611855 LLGL2Q6P1M3 1020 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 SLC13A5Q86YT5 568 aaPredicted RBP11.77□□□□□ -0.53
CDH4-202ENST00000611855 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
CDH4-202ENST00000611855 ETNPPLQ8TBG4 499 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 CKAP2Q8WWK9 683 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
CDH4-202ENST00000611855 EIF2AK1Q9BQI3 630 aaKnown RBP11.77□□□□□ -0.53
CDH4-202ENST00000611855 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 KCNQ5Q9NR82 932 aa11.77□□□□□ -0.53
CDH4-202ENST00000611855 CNOT7Q9UIV1 285 aaKnown RBP11.77□□□□□ -0.53
CDH4-202ENST00000611855 GSTTP1A0A1W2PQM5 241 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 O00370 1275 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 PODXLO00592 558 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 MSH4O15457 936 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 ETS2P15036 469 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 TCP10Q12799 353 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 MAIP1Q8WWC4 291 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 ART4Q93070 314 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 SYT11Q9BT88 431 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 NUP85Q9BW27 656 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 FRMD4BQ9Y2L6 1034 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 DAGLAQ9Y4D2 1042 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 MEIS2O14770 477 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 RCN1Q15293 331 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 SGO2Q562F6 1265 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 RFWD3Q6PCD5 774 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 FAM178BQ8IXR5 827 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 FAM81AQ8TBF8 368 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 DYDC2Q96IM9 177 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 MOV10L1Q9BXT6 1211 aaKnown RBP11.76□□□□□ -0.53
CDH4-202ENST00000611855 TMX4Q9H1E5 349 aaPredicted RBP11.76□□□□□ -0.53
CDH4-202ENST00000611855 PCYOX1Q9UHG3 505 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 CYP26A1O43174 497 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 SNHG28P0DPA3 235 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 CTNNA2P26232 953 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 ITGA8P53708 1063 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 KHDC1Q4VXA5 237 aaKnown RBP11.76□□□□□ -0.53
CDH4-202ENST00000611855 ODR4Q5SWX8 454 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 SNX30Q5VWJ9 437 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 HS2ST1Q7LGA3 356 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 ASAP3Q8TDY4 903 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 HERPUD2Q9BSE4 406 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 MTUS1Q9ULD2 1270 aa11.76□□□□□ -0.53
CDH4-202ENST00000611855 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 DDX39AO00148 427 aaKnown RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 SLC16A3O15427 465 aaKnown RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 CCNG1P51959 295 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 DRG2P55039 364 aaKnown RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 GPC5P78333 572 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 MTM1Q13496 603 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 PPP2R5EQ16537 467 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 HHATQ5VTY9 493 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 SLC47A2Q86VL8 602 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 ZNF653Q96CK0 615 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 NGLY1Q96IV0 654 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 AGPAT3Q9NRZ7 376 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 SERPINB13Q9UIV8 391 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 CHKBQ9Y259 395 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 TP73O15350 636 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 ADCY8P40145 1251 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 FOXB2Q5VYV0 432 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 ZFPM1Q8IX07 1006 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 AGGF1Q8N302 714 aaeCLIP11.75□□□□□ -0.53
CDH4-202ENST00000611855 PPM1KQ8N3J5 372 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 RBBP8NLQ8NC74 664 aaPredicted RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 ZNF564Q8TBZ8 553 aaPredicted RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 LENG9Q96B70 501 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 PARP2Q9UGN5 583 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 ASB3Q9Y575 518 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 KRT36O76013 467 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 CCNB1P14635 433 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 SPDYCQ5MJ68 293 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 CROCCP2Q86T23 111 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 NOP9Q86U38 636 aaKnown RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 RHOT2Q8IXI1 618 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 C4orf33Q8N1A6 199 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 TMEM165Q9HC07 324 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 CHCHD3Q9NX63 227 aaKnown RBP11.75□□□□□ -0.53
CDH4-202ENST00000611855 DCTN4Q9UJW0 460 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 NAALADL1Q9UQQ1 740 aa11.75□□□□□ -0.53
CDH4-202ENST00000611855 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
CDH4-202ENST00000611855 WDR91A4D1P6 747 aa11.74□□□□□ -0.53
CDH4-202ENST00000611855 POC1B-GALNT4F8VUJ3 575 aa11.74□□□□□ -0.53
CDH4-202ENST00000611855 SKIP12755 728 aa11.74□□□□□ -0.53
CDH4-202ENST00000611855 GSTT1P30711 240 aa11.74□□□□□ -0.53
CDH4-202ENST00000611855 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms