RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 TARS2Q9BW92 718 aaKnown RBP9.63□□□□□ -0.87
SMAD4-217ENST00000611848 RSAD1Q9HA92 442 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 PTPRHQ9HD43 1115 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 KANSL3Q9P2N6 904 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 GIT1Q9Y2X7 761 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 PCDHB13Q9Y5F0 798 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 ZMYM2Q9UBW7 1377 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 MYO7AQ13402 2215 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 CARNS1A5YM72 827 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 MEIS3P2A8K0S8 358 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 NRDCO43847 1150 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 TOM1L1O75674 476 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 PPP1R37O75864 691 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 GCNT3O95395 438 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 PIGRP01833 764 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 RPN1P04843 607 aaKnown RBP9.62□□□□□ -0.87
SMAD4-217ENST00000611848 RB1P06400 928 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 GRIN2CQ14957 1233 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 EEF1DP3Q658K8 133 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 MPZL3Q6UWV2 235 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 STXBP4Q6ZWJ1 553 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 Q7L0L9 218 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 MAP4K3Q8IVH8 894 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 TMEM192Q8IY95 271 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 URGCPQ8TCY9 931 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 ARNTL2Q8WYA1 636 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 BICD1Q96G01 975 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 C16orf45Q96MC5 204 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-217ENST00000611848 C17orf80Q9BSJ5 609 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 TCHPQ9BT92 498 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 STRA6Q9BX79 667 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 PLVAPQ9BX97 442 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 BLZF1Q9H2G9 400 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 AAASQ9NRG9 546 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 MTMR10Q9NXD2 777 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 RWDD2AQ9UIY3 292 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 EXOC7Q9UPT5 735 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 PAXBP1Q9Y5B6 917 aa9.62□□□□□ -0.87
SMAD4-217ENST00000611848 MRPL42Q9Y6G3 142 aaKnown RBP9.62□□□□□ -0.87
SMAD4-217ENST00000611848 TDRD15B5MCY1 1934 aaKnown RBP9.62□□□□□ -0.87
SMAD4-217ENST00000611848 KIAA1671Q9BY89 1806 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 PRRC2BQ5JSZ5 2229 aaKnown RBP9.61□□□□□ -0.87
SMAD4-217ENST00000611848 LRRC10BA6NIK2 292 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 C5orf67F2Z3F1 127 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 HNRNPDLO14979 420 aaKnown RBP9.61□□□□□ -0.87
SMAD4-217ENST00000611848 INPPL1O15357 1258 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 CLDN3O15551 220 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 LINC00271P0C7V0 271 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 MCF2P10911 925 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 BMPR1AP36894 532 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 LIG4P49917 911 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 EHHADHQ08426 723 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 ZNF568Q3ZCX4 644 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 EPC2Q52LR7 807 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 ZC2HC1CQ53FD0 456 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-217ENST00000611848 NOMO2Q5JPE7 1267 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 SPOUT1Q5T280 376 aaKnown RBP9.61□□□□□ -0.87
SMAD4-217ENST00000611848 SPECC1LQ69YQ0 1117 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 SMYD4Q8IYR2 804 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-217ENST00000611848 FAM161BQ96MY7 647 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 CDT1Q9H211 546 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 NXF3Q9H4D5 531 aaKnown RBP9.61□□□□□ -0.87
SMAD4-217ENST00000611848 TMEM206Q9H813 350 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 CERS4Q9HA82 394 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 TYW1Q9NV66 732 aaKnown RBP9.61□□□□□ -0.87
SMAD4-217ENST00000611848 SNTG2Q9NY99 539 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 TBC1D7Q9P0N9 293 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 PARP2Q9UGN5 583 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 HES2Q9Y543 173 aa9.61□□□□□ -0.87
SMAD4-217ENST00000611848 KIF2AO00139 706 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-217ENST00000611848 ABLIM1O14639 778 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 KLRC4O43908 158 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 TUBB4AP04350 444 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 LAG3P18627 525 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 AKAP5P24588 427 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 CTNNB1P35222 781 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 PBX1P40424 430 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 GRM5P41594 1212 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 MCL1Q07820 350 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 PSMD2Q13200 908 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 PTPN14Q15678 1187 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 KYAT1Q16773 422 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 CHD9Q3L8U1 2897 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 FAM26FQ5R3K3 315 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 CEP135Q66GS9 1140 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 SLFN12LQ6IEE8 588 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 KLHL10Q6JEL2 608 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 LRRC55Q6ZSA7 311 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 TMEM139Q8IV31 216 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 FBXO22Q8NEZ5 403 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 P2RX5Q93086 422 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 CCDC47Q96A33 483 aaKnown RBP9.6□□□□□ -0.87
SMAD4-217ENST00000611848 ZBTB45Q96K62 511 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-217ENST00000611848 GAD1Q99259 594 aa9.6□□□□□ -0.87
SMAD4-217ENST00000611848 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-217ENST00000611848 C11orf84Q9BUA3 381 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-217ENST00000611848 CCDC94Q9BW85 323 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-217ENST00000611848 APOL6Q9BWW8 343 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms