RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 TNFRSF25Q93038 417 aa13.08□□□□□ -0.32
FDPS-220ENST00000611010 NFKBIZQ9BYH8 718 aa13.08□□□□□ -0.32
FDPS-220ENST00000611010 ZSWIM4Q9H7M6 989 aa13.08□□□□□ -0.32
FDPS-220ENST00000611010 ZSWIM6Q9HCJ5 1215 aa13.08□□□□□ -0.32
FDPS-220ENST00000611010 LTB4R2Q9NPC1 389 aa13.08□□□□□ -0.32
FDPS-220ENST00000611010 GPRC5CQ9NQ84 441 aa13.08□□□□□ -0.32
FDPS-220ENST00000611010 SF3B1O75533 1304 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■■■ 29.6
FDPS-220ENST00000611010 USP24Q9UPU5 2620 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 A0A1B0GUA9 196 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 TBX3O15119 743 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 DKC1O60832 514 aaKnown RBP eCLIP13.07□□□□□ -0.32
FDPS-220ENST00000611010 LILRB5O75023 590 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 GCFC2P16383 781 aaKnown RBP13.07□□□□□ -0.32
FDPS-220ENST00000611010 TGM1P22735 817 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 TARSP26639 723 aaKnown RBP13.07□□□□□ -0.32
FDPS-220ENST00000611010 POU5F1BQ06416 359 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 FZD5Q13467 585 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
FDPS-220ENST00000611010 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.324e-7■□□□□ 9.7
FDPS-220ENST00000611010 PSMD5Q16401 504 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 ZNF528Q3MIS6 628 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 TSSK4Q6SA08 328 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 CD300LGQ6UXG3 332 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 ING5Q8WYH8 240 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 ZNF274Q96GC6 653 aaPredicted RBP13.07□□□□□ -0.32
FDPS-220ENST00000611010 HSD17B14Q9BPX1 270 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 EIF2AK1Q9BQI3 630 aaKnown RBP13.07□□□□□ -0.32
FDPS-220ENST00000611010 PLA2G2FQ9BZM2 168 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 POLR3FQ9H1D9 316 aaPredicted RBP13.07□□□□□ -0.32
FDPS-220ENST00000611010 USP20Q9Y2K6 914 aa13.07□□□□□ -0.32
FDPS-220ENST00000611010 ZFP37Q9Y6Q3 630 aaPredicted RBP13.07□□□□□ -0.32
FDPS-220ENST00000611010 CITO14578 2027 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 KIF26AQ9ULI4 1882 aaPredicted RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 KINO60870 393 aaKnown RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 LYPLA2O95372 231 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 CTDNEP1O95476 244 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
FDPS-220ENST00000611010 HOXA9P31269 272 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 RARRES1P49788 294 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 SCRN1Q12765 414 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 NR5A1Q13285 461 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 TUSC3Q13454 348 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 UBXN2BQ14CS0 331 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 FAM171A1Q5VUB5 890 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 CDCA2Q69YH5 1023 aaPredicted RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 EXOC8Q8IYI6 725 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 FAM177A1Q8N128 213 aaPredicted RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 SLC7A14Q8TBB6 771 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 EPC1Q9H2F5 836 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 PARD6AQ9NPB6 346 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 PRMT8Q9NR22 394 aaPredicted RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 SPATA6Q9NWH7 488 aaPredicted RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
FDPS-220ENST00000611010 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 NCANO14594 1321 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
FDPS-220ENST00000611010 F5P12259 2224 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 SPTLC1O15269 473 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 USO1O60763 962 aaKnown RBP13.05□□□□□ -0.32
FDPS-220ENST00000611010 TADA2AO75478 443 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 DGAT1O75907 488 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 RECQL4O94761 1208 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 CD2BP2O95400 341 aaKnown RBP13.05□□□□□ -0.32
FDPS-220ENST00000611010 POU2F2P09086 479 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 TDGF1P13385 188 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 FCARP24071 287 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 CREMQ03060 361 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 PRKCQQ04759 706 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 TFDP1Q14186 410 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 PPM1LQ5SGD2 360 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
FDPS-220ENST00000611010 OTUD6AQ7L8S5 288 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 PIGOQ8TEQ8 1089 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 CLDN23Q96B33 292 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 SMG5Q9UPR3 1016 aaKnown RBP13.05□□□□□ -0.32
FDPS-220ENST00000611010 CFAP47Q6ZTR5 3102 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 RALGAPA1Q6GYQ0 2036 aa13.05□□□□□ -0.32
FDPS-220ENST00000611010 TSC2P49815 1807 aa13.04□□□□□ -0.32
FDPS-220ENST00000611010 FAM170BA6NMN3 283 aa13.04□□□□□ -0.32
FDPS-220ENST00000611010 CPLX1O14810 134 aa13.04□□□□□ -0.32
FDPS-220ENST00000611010 LAMTOR5O43504 91 aa13.04□□□□□ -0.32
FDPS-220ENST00000611010 NR1I2O75469 434 aa13.04□□□□□ -0.32
FDPS-220ENST00000611010 CEBPBP17676 345 aa13.04□□□□□ -0.32
FDPS-220ENST00000611010 PTMSP20962 102 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms