RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 EXOC3L1Q86VI1 746 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 LDHDQ86WU2 507 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 THNSL1Q8IYQ7 743 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 VPS52Q8N1B4 723 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 CNKSR1Q969H4 720 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 ZBTB10Q96DT7 871 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 ATXN7L3BQ96GX2 97 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 UBN1Q9NPG3 1134 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 PACSIN3Q9UKS6 424 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 MYH3P11055 1940 aa6.9□□□□□ -1.3
RPF2-204ENST00000607388 GYS1P13807 737 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 COILP38432 576 aaPredicted RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 SMTNP53814 917 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 ELF3P78545 371 aaPredicted RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 SLC20A2Q08357 652 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 BYSLQ13895 437 aaKnown RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 FASTKD3Q14CZ7 662 aaKnown RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 C6orf118Q5T5N4 469 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 APOBEC3HQ6NTF7 200 aaKnown RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 SWSAP1Q6NVH7 229 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 CASC4Q6P4E1 433 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 ZNF720Q7Z2F6 126 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 SLC13A5Q86YT5 568 aaPredicted RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 LRRC57Q8N9N7 239 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 LRRC8CQ8TDW0 803 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 MAML1Q92585 1016 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 HSPH1Q92598 858 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 MCUR1Q96AQ8 359 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 CCDC124Q96CT7 223 aaKnown RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 RMDN2Q96LZ7 410 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 RILPQ96NA2 401 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 RBM15Q96T37 977 aaKnown RBP eCLIP6.9□□□□□ -1.31
RPF2-204ENST00000607388 IQCGQ9H095 443 aaKnown RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 ARHGEF10LQ9HCE6 1279 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 ACSS2Q9NR19 701 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 ZNF277Q9NRM2 450 aaPredicted RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 ADAM22Q9P0K1 906 aa6.9□□□□□ -1.31
RPF2-204ENST00000607388 SUCLA2Q9P2R7 463 aaPredicted RBP6.9□□□□□ -1.31
RPF2-204ENST00000607388 C4AP0C0L4 1744 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 C4BP0C0L5 1744 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 PFASO15067 1338 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ANKRD12Q6UB98 2062 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 KIAA0391O15091 583 aaKnown RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 ATP6V1G2O95670 118 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 KRT1P04264 644 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 F7P08709 466 aaPredicted RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 ECHS1P30084 290 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 PRELPP51888 382 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 DDR1Q08345 913 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 PDIA2Q13087 525 aaKnown RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 RASA3Q14644 834 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 DLGAP5Q15398 846 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 MUM1Q2TAK8 710 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ARHGEF16Q5VV41 709 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ZDHHC14Q8IZN3 488 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SLC25A41Q8N5S1 370 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 EMC1Q8N766 993 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 EFCAB3Q8N7B9 438 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ACTRT1Q8TDG2 376 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SEMA4DQ92854 862 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 TMEM121Q9BTD3 319 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SLITRK6Q9H5Y7 841 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 C1orf112Q9NSG2 853 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ARMCX1Q9P291 453 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 GABBR1Q9UBS5 961 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 TELO2Q9Y4R8 837 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 MAD1L1Q9Y6D9 718 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 USH1CQ9Y6N9 552 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 TLR3O15455 904 aaKnown RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 ECE2O60344 883 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 PHF2O75151 1096 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ENTPD5O75356 428 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SSTR1P30872 391 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 CETN2P41208 172 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 FNTAP49354 379 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ARSEP51690 589 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SNRNP35Q16560 246 aaKnown RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 EDRF1Q3B7T1 1238 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 BRDTQ58F21 947 aaPredicted RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 SPATA21Q7Z572 469 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 PALM2Q8IXS6 379 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 GLIS1Q8NBF1 620 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 TTC1Q99614 292 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 DDX50Q9BQ39 737 aaKnown RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 PLVAPQ9BX97 442 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 OSBPL1AQ9BXW6 950 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 FAM129AQ9BZQ8 928 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SMYD3Q9H7B4 428 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 SLC12A6Q9UHW9 1150 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 INPP5FQ9Y2H2 1132 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 TTLL3Q9Y4R7 772 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 hCG_2014768A0A024R1R8 64 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.89□□□□□ -1.31
RPF2-204ENST00000607388 PLSCR1O15162 318 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 RIPK2O43353 540 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ATP9AO75110 1047 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 BBOX1O75936 387 aa6.89□□□□□ -1.31
RPF2-204ENST00000607388 ADRB2P07550 413 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms