RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ZSCAN32Q9NX65 697 aa6.97□□□□□ -1.29
CUX1-220ENST00000607092 PARP2Q9UGN5 583 aa6.97□□□□□ -1.29
CUX1-220ENST00000607092 VAV3Q9UKW4 847 aa6.97□□□□□ -1.29
CUX1-220ENST00000607092 PCDHA12Q9UN75 941 aa6.97□□□□□ -1.29
CUX1-220ENST00000607092 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.97□□□□□ -1.29
CUX1-220ENST00000607092 STK36Q9NRP7 1315 aa6.97□□□□□ -1.29
CUX1-220ENST00000607092 MAP1BP46821 2468 aaKnown RBP6.96□□□□□ -1.29
CUX1-220ENST00000607092 CACNA1IQ9P0X4 2223 aa6.96□□□□□ -1.29
CUX1-220ENST00000607092 TMEM150BA6NC51 233 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 EML1O00423 815 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 ZNF197O14709 1029 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 N4BP3O15049 544 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 B4GALT3O60512 393 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 EIF5BO60841 1220 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 LRP3O75074 770 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 ECI2O75521 394 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 DCNP07585 359 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 GLULP15104 373 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 ARF4P18085 180 aaPredicted RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 RBM25P49756 843 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 MBTD1Q05BQ5 628 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 SPIRE1Q08AE8 756 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 UBXN2BQ14CS0 331 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 PPP2R5AQ15172 486 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 ANKRD1Q15327 319 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 PSMD5Q16401 504 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 FAM187BQ17R55 369 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 DCAF4L1Q3SXM0 396 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 PABPC1LQ4VXU2 614 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 SLC44A4Q53GD3 710 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 FAM171A1Q5VUB5 890 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 NCAPH2Q6IBW4 605 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 MAMSTRQ6ZN01 415 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 ANKS3Q6ZW76 656 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 GRASPQ7Z6J2 395 aaPredicted RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 TPH2Q8IWU9 490 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 LEMD2Q8NC56 503 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 ERMNQ8TAM6 284 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 RSAD2Q8WXG1 361 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 DDX1Q92499 740 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 FGF13Q92913 245 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 MSANTD3Q96H12 275 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 ZFP42Q96MM3 310 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 SH2D3AQ9BRG2 576 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 APOL6Q9BWW8 343 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 EIF2AQ9BY44 585 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 EPC1Q9H2F5 836 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 NCOA5Q9HCD5 579 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 ZSWIM6Q9HCJ5 1215 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 AVENQ9NQS1 362 aaPredicted RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 GMEB2Q9UKD1 530 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 CDV3Q9UKY7 258 aaKnown RBP6.96□□□□□ -1.3
CUX1-220ENST00000607092 MAFFQ9ULX9 164 aa6.96□□□□□ -1.3
CUX1-220ENST00000607092 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 FAM170BA6NMN3 283 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 TMEM189-UBE2V1I3L0A0 370 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 DPYSL4O14531 572 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 SLC37A4O43826 429 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 EDIL3O43854 480 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 MICAL2O94851 1124 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 SLITRK3O94933 977 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 NPTXRO95502 500 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 SPATA31D3P0C874 917 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 ELF1P32519 619 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 ARL2P36404 184 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 AFF1P51825 1210 aaKnown RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 EFNA5P52803 228 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 GPC5P78333 572 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 CSTF1Q05048 431 aaKnown RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 ADCY1Q08828 1119 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 ORC2Q13416 577 aaPredicted RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 CAPSQ13938 189 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 RAB33AQ14088 237 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 CALCRLQ16602 461 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 MAPK6Q16659 721 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 AMHR2Q16671 573 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 AXDND1Q5T1B0 1012 aaPredicted RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 SPATA31D4Q6ZUB0 917 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 TAS1R1Q7RTX1 841 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 CEP57Q86XR8 500 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 GPIHBP1Q8IV16 184 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 ELMOD1Q8N336 334 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 KRI1Q8N9T8 703 aaKnown RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 SUMF1Q8NBK3 374 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 ZBTB44Q8NCP5 570 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 IRF7Q92985 503 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 GJA10Q969M2 543 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 E2F7Q96AV8 911 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 CLDN23Q96B33 292 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 DYDC2Q96IM9 177 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 NACC1Q96RE7 527 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 HSD17B14Q9BPX1 270 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 EIF2AK1Q9BQI3 630 aaKnown RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 RTKNQ9BST9 563 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 GPR62Q9BZJ7 368 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 LTB4R2Q9NPC1 389 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 TOPORSQ9NS56 1045 aaPredicted RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 BMP2KQ9NSY1 1161 aaPredicted RBP6.95□□□□□ -1.3
CUX1-220ENST00000607092 SLC38A7Q9NVC3 462 aa6.95□□□□□ -1.3
CUX1-220ENST00000607092 KCNG1Q9UIX4 513 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms