RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FRMD4BQ9Y2L6 1034 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 NLRC5Q86WI3 1866 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 TTC26A0AVF1 554 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 ARL5CA6NH57 179 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 ZNF233A6NK53 670 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 PTGESO14684 152 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 IKBKBO14920 756 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 SLC16A3O15427 465 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 EOMESO95936 686 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 LDHAP00338 332 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 TRIM49P0CI25 452 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 TRIM49CP0CI26 452 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 PSMC2P35998 433 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 SCNN1GP51170 649 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 DLG4P78352 724 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 CYP24A1Q07973 514 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 MYBPC2Q14324 1141 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 SHHQ15465 462 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 KYAT1Q16773 422 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 SLC10A6Q3KNW5 377 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 CCDC40Q4G0X9 1142 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 GLRA4Q5JXX5 417 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 RASIP1Q5U651 963 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 FAM43BQ6ZT52 329 aaPredicted RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 GAS2L3Q86XJ1 694 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 HACE1Q8IYU2 909 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 TMEM130Q8N3G9 435 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 RNF214Q8ND24 703 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 CCDC127Q96BQ5 260 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 PGBD4Q96DM1 585 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 CNOT6LQ96LI5 555 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 ACAP3Q96P50 834 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 GAD1Q99259 594 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 HSD3B7Q9H2F3 369 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 ELAC1Q9H777 363 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 RPF1Q9H9Y2 349 aaKnown RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 RSAD1Q9HA92 442 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 KIAA1586Q9HCI6 787 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 PDE11AQ9HCR9 933 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 TOPORSQ9NS56 1045 aaPredicted RBP8.35□□□□□ -1.07
MSH6-211ENST00000606499 FANCLQ9NW38 375 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 HCSTQ9UBK5 93 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 PLAGL2Q9UPG8 496 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 SLC4A7Q9Y6M7 1214 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 CDH23Q9H251 3354 aa8.35□□□□□ -1.07
MSH6-211ENST00000606499 PDE4DIPQ5VU43 2346 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 LRRIQ3A6PVS8 624 aaPredicted RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 LACTBL1A8MY62 500 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 B4GALT3O60512 393 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 OFD1O75665 1012 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 IL18RAPO95256 599 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 POMCP01189 267 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 NFICP08651 508 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 DLATP10515 647 aaKnown RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 EPB41P11171 864 aaKnown RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 BFSP1Q12934 665 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 PSMD6Q15008 389 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 PAN2Q504Q3 1202 aaKnown RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 DCAF17Q5H9S7 520 aaPredicted RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 C1orf220Q5T0J3 134 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 LMBRD2Q68DH5 695 aaPredicted RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 FAM109BQ6ICB4 259 aaPredicted RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 JADE1Q6IE81 842 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 GLB1LQ6UWU2 654 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 ALKAL1Q6UXT8 129 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 FILIP1Q7Z7B0 1213 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 EFCAB13Q8IY85 973 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 GSTCDQ8NEC7 633 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 TOP1MTQ969P6 601 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 C18orf25Q96B23 403 aaPredicted RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 BORCS6Q96GS4 357 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 MFSD14AQ96MC6 490 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 ZMAT2Q96NC0 199 aaKnown RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 CASD1Q96PB1 797 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 POP1Q99575 1024 aaKnown RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 MKNK1Q9BUB5 465 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 MTIF3Q9H2K0 278 aaKnown RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 THAP9Q9H5L6 903 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 RC3H2Q9HBD1 1191 aaKnown RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 UBN1Q9NPG3 1134 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 MIOSQ9NXC5 875 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 CNTN3Q9P232 1028 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 TUBGCP4Q9UGJ1 667 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 ARMCX3Q9UH62 379 aaPredicted RBP8.34□□□□□ -1.07
MSH6-211ENST00000606499 GIT1Q9Y2X7 761 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 PCDHB7Q9Y5E2 793 aa8.34□□□□□ -1.07
MSH6-211ENST00000606499 COL4A4P53420 1690 aaPredicted RBP8.34□□□□□ -1.08
MSH6-211ENST00000606499 TSC2P49815 1807 aa8.33□□□□□ -1.08
MSH6-211ENST00000606499 SMIM28A0A1B0GU29 152 aa8.33□□□□□ -1.08
MSH6-211ENST00000606499 TBKBP1A7MCY6 615 aa8.33□□□□□ -1.08
MSH6-211ENST00000606499 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
MSH6-211ENST00000606499 BECN2A8MW95 431 aa8.33□□□□□ -1.08
MSH6-211ENST00000606499 GRXCR1A8MXD5 290 aa8.33□□□□□ -1.08
MSH6-211ENST00000606499 KCNJ18B7U540 433 aa8.33□□□□□ -1.08
MSH6-211ENST00000606499 MAPK13O15264 365 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms