RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZNF558Q96NG5 402 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 C11orf84Q9BUA3 381 aaPredicted RBP15.56■□□□□ 0.08
CTSA-211ENST00000606066 PLEKHA5Q9HAU0 1116 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
CTSA-211ENST00000606066 AGO2Q9UKV8 859 aaKnown RBP15.56■□□□□ 0.08
CTSA-211ENST00000606066 PCDHA5Q9Y5H7 936 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 LPXNO60711 386 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 ALDH2P05091 517 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 THP07101 528 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 LINC00271P0C7V0 271 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 PPM1AP35813 382 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 AFF1P51825 1210 aaKnown RBP15.55■□□□□ 0.08
CTSA-211ENST00000606066 POU5F1Q01860 360 aaKnown RBP15.55■□□□□ 0.08
CTSA-211ENST00000606066 HSP90AA2PQ14568 343 aaPredicted RBP15.55■□□□□ 0.08
CTSA-211ENST00000606066 ARMCX5Q6P1M9 558 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 NELFCDQ8IXH7 590 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 KIAA0895Q8NCT3 520 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 SPATA20Q8TB22 786 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 P2RX5Q93086 422 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 TMEM175Q9BSA9 504 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 HAPLN2Q9GZV7 340 aa15.55■□□□□ 0.08
CTSA-211ENST00000606066 RPF1Q9H9Y2 349 aaKnown RBP15.55■□□□□ 0.08
CTSA-211ENST00000606066 PRRC2BQ5JSZ5 2229 aaKnown RBP15.55■□□□□ 0.08
CTSA-211ENST00000606066 PIEZO1Q92508 2521 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 TISP43B9A030 160 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 H3BNC9 293 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 ZC3H11AO75152 810 aaKnown RBP eCLIP15.54■□□□□ 0.08
CTSA-211ENST00000606066 ADSSP30520 456 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 BCAR1P56945 870 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 SEZ6Q53EL9 994 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 XKR4Q5GH76 650 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 ZNF658Q5TYW1 1059 aaPredicted RBP15.54■□□□□ 0.08
CTSA-211ENST00000606066 KCNT2Q6UVM3 1135 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 CD302Q8IX05 232 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 COLGALT1Q8NBJ5 622 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 GSTCDQ8NEC7 633 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 TSPAN18Q96SJ8 248 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 NRDE2Q9H7Z3 1164 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 MIOSQ9NXC5 875 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.54■□□□□ 0.08
CTSA-211ENST00000606066 MYH11P35749 1972 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 PTPRSQ13332 1948 aa15.54■□□□□ 0.08
CTSA-211ENST00000606066 TGFB1I1O43294 461 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 FAM189A1O60320 539 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 DDHD2O94830 711 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 HOXD13P35453 343 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 KRT17Q04695 432 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 PPP2R3AQ06190 1150 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 GPM6BQ13491 265 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 SLC10A6Q3KNW5 377 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 ALKAL1Q6UXT8 129 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 SPRED2Q7Z698 418 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 ZNF280BQ86YH2 543 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 GUF1Q8N442 669 aaKnown RBP15.53■□□□□ 0.08
CTSA-211ENST00000606066 KLHL23Q8NBE8 558 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 SNX27Q96L92 541 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 IKZF4Q9H2S9 585 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 EPHX3Q9H6B9 360 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 KIAA1586Q9HCI6 787 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 AGPAT3Q9NRZ7 376 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 SLC38A7Q9NVC3 462 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 SPG21Q9NZD8 308 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 CNTN3Q9P232 1028 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 HCSTQ9UBK5 93 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 PUF60Q9UHX1 559 aaKnown RBP15.53■□□□□ 0.08
CTSA-211ENST00000606066 CPSF3Q9UKF6 684 aaKnown RBP15.53■□□□□ 0.08
CTSA-211ENST00000606066 FAN1Q9Y2M0 1017 aa15.53■□□□□ 0.08
CTSA-211ENST00000606066 SMIM28A0A1B0GU29 152 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 PDXKO00764 312 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 PTGESO14684 152 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 CALUO43852 315 aaPredicted RBP15.52■□□□□ 0.08
CTSA-211ENST00000606066 EXTL3O43909 919 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 MBD3O95983 291 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 GALTP07902 379 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 CXCL8P10145 99 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 KCNE1P15382 129 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 PPP1R2P41236 205 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 TNFSF9P41273 254 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 OR1G1P47890 313 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 ACOT2P49753 483 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 UBE3AQ05086 875 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 DSC1Q08554 894 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 TUSC3Q13454 348 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 CAMK4Q16566 473 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 PTPROQ16827 1216 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 C12orf56Q8IXR9 622 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 COLGALT2Q8IYK4 626 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 GPD1LQ8N335 351 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 ERCC4Q92889 916 aaPredicted RBP15.52■□□□□ 0.08
CTSA-211ENST00000606066 TMEM169Q96HH4 297 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 FAM213AQ9BRX8 229 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 LRFN3Q9BTN0 628 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 LMAN2LQ9H0V9 348 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 PCIF1Q9H4Z3 704 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 STK39Q9UEW8 545 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.08
CTSA-211ENST00000606066 TTC26A0AVF1 554 aa15.51■□□□□ 0.07
CTSA-211ENST00000606066 XPOTO43592 962 aaKnown RBP15.51■□□□□ 0.07
CTSA-211ENST00000606066 GPR37L1O60883 481 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms