RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SP110Q9HB58 689 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PANK4Q9NVE7 773 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 CTTNBP2NLQ9P2B4 639 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 ATXN10Q9UBB4 475 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 SUN2Q9UH99 717 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 BAIAP2L1Q9UHR4 511 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 TSPYL4Q9UJ04 414 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 TAF6LQ9Y6J9 622 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 BCL9O00512 1426 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 MST1RQ04912 1400 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 NPATQ14207 1427 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 COL15A1P39059 1388 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 SPEF2Q9C093 1822 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 A0A1W2PQJ5 194 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 DPPA5A6NC42 116 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 BTBD19C9JJ37 291 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 STRNO43815 780 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CREB3O43889 395 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 USO1O60763 962 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TRIM13O60858 407 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 DIAPH2O60879 1101 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TACC1O75410 805 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 SKAP2O75563 359 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CELA3BP08861 270 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ACADSP16219 412 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 PEX19P40855 299 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CTCFP49711 727 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 COPB1P53618 953 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 PCBP3P57721 371 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 HERVK_113P62684 666 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 RNF4P78317 190 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCT2P78371 535 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TEKQ02763 1124 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 BNIP1Q12981 228 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CUL1Q13616 776 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 EIF4A2Q14240 407 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TTF1Q15361 905 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TAF7Q15545 349 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 RRP12Q5JTH9 1297 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 SPDYAQ5MJ70 313 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ANKRD20A2Q5SQ80 823 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ACBD5Q5T8D3 534 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 MEI1Q5TIA1 1274 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ANKRD20A1Q5TYW2 823 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ANKRD20A3Q5VUR7 823 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 OR52E8Q6IFG1 317 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 SULT6B1Q6IMI4 303 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ANO7Q6IWH7 933 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 IRGCQ6NXR0 463 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 WDR59Q6PJI9 974 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 RNF111Q6ZNA4 994 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 STOX1Q6ZVD7 989 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ASRGL1Q7L266 308 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 MCM10Q7L590 875 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 LCA5Q86VQ0 697 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 SLFN12Q8IYM2 578 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 LRRC43Q8N309 656 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 AFAP1Q8N556 730 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ENDOVQ8N8Q3 282 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 STKLD1Q8NE28 680 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 PPP2R3CQ969Q6 453 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 AZIN2Q96A70 460 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 EAF2Q96CJ1 260 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TLCD1Q96CP7 247 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CHMP6Q96FZ7 201 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 LTV1Q96GA3 475 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 RBM17Q96I25 401 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 COG3Q96JB2 828 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 PBKQ96KB5 322 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 IFT74Q96LB3 600 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TCEANC2Q96MN5 208 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC43Q96MW1 224 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 NEUROD6Q96NK8 337 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TMEM237Q96Q45 408 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 CHP1Q99653 195 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 DUSP9Q99956 384 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 LZTS2Q9BRK4 669 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 PYM1Q9BRP8 204 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 FSD1Q9BTV5 496 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TMEM109Q9BVC6 243 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 TRIM7Q9C029 511 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 YIPF3Q9GZM5 350 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 MAF1Q9H063 256 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 RAB17Q9H0T7 212 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ISCUQ9H1K1 167 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 RANBP17Q9H2T7 1088 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 VCX3BQ9H321 246 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 VCX3AQ9NNX9 186 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 GCM1Q9NP62 436 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ATP8A2Q9NTI2 1148 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 RWDD2AQ9UIY3 292 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 GUCA1BQ9UMX6 200 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNF510Q9Y2H8 683 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 WDR37Q9Y2I8 494 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 HYOU1Q9Y4L1 999 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 SRPRBQ9Y5M8 271 aaKnown RBP4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 KAT6BQ8WYB5 2073 aa4.42□□□□□ -1.7
HMGB1P50-201ENST00000605814 C3P01024 1663 aa4.41□□□□□ -1.7
HMGB1P50-201ENST00000605814 NFAT5O94916 1531 aa4.41□□□□□ -1.7
HMGB1P50-201ENST00000605814 USP31Q70CQ4 1352 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms