RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 AK8Q96MA6 479 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 KIFC3Q9BVG8 833 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 NFS1Q9Y697 457 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 CCDC160A6NGH7 325 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 MARK3P27448 753 aa16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 CLK2P49760 499 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-206ENST00000602655 VWA5AO00534 786 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 HNRNPRO43390 633 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 CYP2J2P51589 502 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 PIGWQ7Z7B1 504 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 FAM160B2Q86V87 743 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 DNAAF5Q86Y56 855 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 ZNF507Q8TCN5 953 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 LRRC8CQ8TDW0 803 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 HIC2Q96JB3 615 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 REEP2Q9BRK0 252 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 TNS1Q9HBL0 1735 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 ENTPD5O75356 428 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 MYBP10242 640 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 KLRC1P26715 233 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 MCL1Q07820 350 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 CNNM4Q6P4Q7 775 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 ADSSL1Q8N142 457 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 PPFIBP2Q8ND30 876 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 P2RX5Q93086 422 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 TRIM51Q9BSJ1 452 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 UNC45AQ9H3U1 944 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 LNPEPQ9UIQ6 1025 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 TISP43B9A030 160 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 F8VZ95 297 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 hCG_1984214I3L0E3 225 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 PAEPP09466 180 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 HARSP12081 509 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 TARSP26639 723 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 EPHX2P34913 555 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 MPP3Q13368 585 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 PPP1R18Q6NYC8 613 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 ZNF662Q6ZS27 426 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 ZNF713Q8N859 430 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 SYTL5Q8TDW5 730 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 STK32AQ8WU08 396 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 LXNQ9BS40 222 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 CARD9Q9H257 536 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 CTTNBP2NLQ9P2B4 639 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 PPP1R9AQ9ULJ8 1098 aa16.39■□□□□ 0.21
PPFIA3-206ENST00000602655 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 USP46P62068 366 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 TMEM132BQ14DG7 1078 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 APOBEC3FQ8IUX4 373 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 FITM2Q8N6M3 262 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 WRAP73Q9P2S5 460 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ADAMTS1Q9UHI8 967 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 HAO1Q9UJM8 370 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 EPHB6O15197 1021 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 SUPT3HO75486 399 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 SREBF1P36956 1147 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 USP11P51784 963 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 COG2Q14746 738 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ANKRD23Q86SG2 305 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 TTC8Q8TAM2 541 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 PLAGL2Q9UPG8 496 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ARHGEF35A5YM69 484 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ICAM1P05362 532 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ALADP13716 330 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 RAPGEF1Q13905 1077 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 LBRQ14739 615 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ZNF572Q7Z3I7 529 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 MYOCDQ8IZQ8 938 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ZNF536O15090 1300 aa16.38■□□□□ 0.21
PPFIA3-206ENST00000602655 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 RBM47A0AV96 593 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 ITGA4P13612 1032 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 CCNFP41002 786 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 P3H1Q32P28 736 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 SLC9C1Q4G0N8 1177 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 TMC3Q7Z5M5 1100 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 CCDC65Q8IXS2 484 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 PHC3Q8NDX5 983 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 LENG9Q96B70 501 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 ATXN10Q9UBB4 475 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 ARL2BPQ9Y2Y0 163 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 ZNF711Q9Y462 761 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 CYP11B2P19099 503 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 ODR4Q5SWX8 454 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 PBKQ96KB5 322 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 LRRC42Q9Y546 428 aa16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-206ENST00000602655 KRT13P13646 458 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 FXR2P51116 673 aaKnown RBP eCLIP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 BNIP1Q12981 228 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 XKR9Q5GH70 373 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 FAM102BQ5T8I3 360 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 CYFIP1Q7L576 1253 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms