RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 ARHGEF3Q9NR81 526 aa22.3■■□□□ 1.16
PPFIA3-204ENST00000602492 NUMBLQ9Y6R0 609 aa22.3■■□□□ 1.16
PPFIA3-204ENST00000602492 OR52Z1P0C646 297 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 NAMPTP43490 491 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 GUCY1B3Q02153 619 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 ORC2Q13416 577 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 PPM1LQ5SGD2 360 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 PHLDB3Q6NSJ2 640 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 GRASPQ7Z6J2 395 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 ADSSL1Q8N142 457 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 CCDC113Q9H0I3 377 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 SLC2A4RGQ9NR83 387 aa22.29■■□□□ 1.16
PPFIA3-204ENST00000602492 DOCK6Q96HP0 2047 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 EIF5BO60841 1220 aaKnown RBP22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 C8AP07357 584 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 NAB2Q15742 525 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 DCAF4L1Q3SXM0 396 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 CXCL16Q9H2A7 254 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 DAXXQ9UER7 740 aaPredicted RBP22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 CDH7Q9ULB5 785 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 USP20Q9Y2K6 914 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 GDAQ9Y2T3 454 aa22.28■■□□□ 1.16
PPFIA3-204ENST00000602492 XYLBO75191 536 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 HOXA9P31269 272 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 EFNA5P52803 228 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 ST3GAL1Q11201 340 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 ZNF174Q15697 407 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 EEF1DP3Q658K8 133 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 HAUS3Q68CZ6 603 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 DCLRE1AQ6PJP8 1040 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 ST13P5Q8NFI4 369 aaPredicted RBP22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 IFT74Q96LB3 600 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 POLIQ9UNA4 740 aa22.27■■□□□ 1.16
PPFIA3-204ENST00000602492 CCL16O15467 120 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 ADAM12O43184 909 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 EDN1P05305 212 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 MUTP22033 750 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 NTHL1P78549 312 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 FOXK2Q01167 660 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 SPECC1Q5M775 1068 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 APBB1IPQ7Z5R6 666 aaPredicted RBP22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 C8orf76Q96K31 380 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 KIFC3Q9BVG8 833 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 SIT1Q9Y3P8 196 aa22.26■■□□□ 1.15
PPFIA3-204ENST00000602492 DCNP07585 359 aaKnown RBP22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 RBM25P49756 843 aaKnown RBP22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 RAB33AQ14088 237 aa22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 MTSS1LQ765P7 747 aa22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 SLC7A14Q8TBB6 771 aa22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 KIFAP3Q92845 792 aa22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 FGF14Q92915 247 aa22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 FOXP1Q9H334 677 aaPredicted RBP22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 SEMA4AQ9H3S1 761 aa22.25■■□□□ 1.15
PPFIA3-204ENST00000602492 TMEM189-UBE2V1I3L0A0 370 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 POU2F2P09086 479 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 FGFR3P22607 806 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 OR1D2P34982 312 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 CCT6AP40227 531 aaKnown RBP22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 GLRA4Q5JXX5 417 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 TTC38Q5R3I4 469 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 AXDND1Q5T1B0 1012 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 ATF7IP2Q5U623 682 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 PARM1Q6UWI2 310 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 KCNG4Q8TDN1 519 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 FGF13Q92913 245 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 SHDQ96IW2 340 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 RPP25Q9BUL9 199 aaKnown RBP22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 BHMT2Q9H2M3 363 aa22.24■■□□□ 1.15
PPFIA3-204ENST00000602492 VWA8A3KMH1 1905 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 B3GAT3O94766 335 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 GPC5P78333 572 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 GNL2Q13823 731 aaKnown RBP22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 UVSSAQ2YD98 709 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 NT5DC1Q5TFE4 455 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 CCDC83Q8IWF9 413 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 UROC1Q96N76 676 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 PPP1R10Q96QC0 940 aaKnown RBP22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 POLD4Q9HCU8 107 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 DLGAP2Q9P1A6 1054 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 MTRRQ9UBK8 725 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 LIMCH1Q9UPQ0 1083 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 CACNA1AO00555 2505 aa22.23■■□□□ 1.15
PPFIA3-204ENST00000602492 TRAPPC3O43617 180 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 LMNAP02545 664 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 CLCNKBP51801 687 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 STARD6P59095 220 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 RTL10Q7L3V2 364 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 PJA1Q8NG27 643 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 ITFG1Q8TB96 612 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 LLPHQ9BRT6 129 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 FOXQ1Q9C009 403 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 LRWD1Q9UFC0 647 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 CDY1Q9Y6F8 540 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 R4GN57 208 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 CACNA1IQ9P0X4 2223 aa22.22■■□□□ 1.15
PPFIA3-204ENST00000602492 K7ERI5 159 aa22.21■■□□□ 1.15
PPFIA3-204ENST00000602492 TRAPPC10P48553 1259 aa22.21■■□□□ 1.15
PPFIA3-204ENST00000602492 FXR2P51116 673 aaKnown RBP eCLIP22.21■■□□□ 1.15
PPFIA3-204ENST00000602492 ECM1Q16610 540 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms