RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 SPATA31D4Q6ZUB0 917 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 CEP57Q86XR8 500 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 MYCT1Q8N699 235 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 FEZF2Q8TBJ5 459 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 RAD54LQ92698 747 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 CLIC6Q96NY7 704 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 NECTIN4Q96NY8 510 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 ACAP3Q96P50 834 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 REEP2Q9BRK0 252 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 ZHX3Q9H4I2 956 aa23.11■■□□□ 1.29
SNRPA-211ENST00000601545 DAXXQ9UER7 740 aaPredicted RBP23.11■■□□□ 1.29
SNRPA-211ENST00000601545 SMIM28A0A1B0GU29 152 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 STX6O43752 255 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 FAM13AO94988 1023 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 KIF4AO95239 1232 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 MAPTP10636 758 aaKnown RBP23.1■■□□□ 1.29
SNRPA-211ENST00000601545 MCF2P10911 925 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 FAM171A1Q5VUB5 890 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 PRSS55Q6UWB4 352 aaPredicted RBP23.1■■□□□ 1.29
SNRPA-211ENST00000601545 MPZL3Q6UWV2 235 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 CCSER1Q9C0I3 900 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 TOPORSQ9NS56 1045 aaPredicted RBP23.1■■□□□ 1.29
SNRPA-211ENST00000601545 ANKFY1Q9P2R3 1169 aa23.1■■□□□ 1.29
SNRPA-211ENST00000601545 FBXO2Q9UK22 296 aaPredicted RBP23.1■■□□□ 1.29
SNRPA-211ENST00000601545 SF3B1O75533 1304 aaKnown RBP eCLIP23.09■■□□□ 1.29
SNRPA-211ENST00000601545 GLUD1P00367 558 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 RPL17P18621 184 aaKnown RBP23.09■■□□□ 1.29
SNRPA-211ENST00000601545 PROZP22891 400 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 IGFBP6P24592 240 aaPredicted RBP23.09■■□□□ 1.29
SNRPA-211ENST00000601545 DDIT3P35638 169 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 MATR3P43243 847 aaKnown RBP eCLIP23.09■■□□□ 1.29
SNRPA-211ENST00000601545 SEZ6Q53EL9 994 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 HAUS6Q7Z4H7 955 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 SNX21Q969T3 373 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 BICD1Q96G01 975 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 PPP1R10Q96QC0 940 aaKnown RBP23.09■■□□□ 1.29
SNRPA-211ENST00000601545 USP28Q96RU2 1077 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 SFXN1Q9H9B4 322 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 MAN1C1Q9NR34 630 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 CCDC39Q9UFE4 941 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 ODF2LQ9ULJ1 636 aa23.09■■□□□ 1.29
SNRPA-211ENST00000601545 SRPRBQ9Y5M8 271 aaKnown RBP23.09■■□□□ 1.29
SNRPA-211ENST00000601545 ABLIM1O14639 778 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 TOM1L1O75674 476 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 CLCNKBP51801 687 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 RTP2Q5QGT7 225 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 DCLRE1AQ6PJP8 1040 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 GPR149Q86SP6 731 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 LARP4BQ92615 738 aaKnown RBP23.08■■□□□ 1.29
SNRPA-211ENST00000601545 TTPALQ9BTX7 342 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 ZSCAN16Q9H4T2 348 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-211ENST00000601545 GOLGA2P5Q9HBQ8 144 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.08■■□□□ 1.29
SNRPA-211ENST00000601545 NR2E1Q9Y466 385 aa23.08■■□□□ 1.29
SNRPA-211ENST00000601545 TDRD15B5MCY1 1934 aaKnown RBP23.08■■□□□ 1.28
SNRPA-211ENST00000601545 PRR33A8MZF0 331 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 H0YCG3 227 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 CLDN3O15551 220 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 B3GAT3O94766 335 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 NCKAP1LP55160 1127 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 ALKAL1Q6UXT8 129 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 PANK2Q9BZ23 570 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 PARVGQ9HBI0 331 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 FNIP2Q9P278 1114 aa23.07■■□□□ 1.28
SNRPA-211ENST00000601545 C2CD4DB7Z1M9 353 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 TRAK2O60296 914 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 BRD1O95696 1058 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 ELAVL2Q12926 359 aaKnown RBP23.06■■□□□ 1.28
SNRPA-211ENST00000601545 XKR4Q5GH76 650 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 FOXD4L5Q5VV16 416 aaPredicted RBP23.06■■□□□ 1.28
SNRPA-211ENST00000601545 RRAGBQ5VZM2 374 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 ZPBP2Q6X784 338 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 HSCBQ8IWL3 235 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 GPR65Q8IYL9 337 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 FOXD4L4Q8WXT5 416 aaPredicted RBP23.06■■□□□ 1.28
SNRPA-211ENST00000601545 EDAQ92838 391 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 ZMAT2Q96NC0 199 aaKnown RBP23.06■■□□□ 1.28
SNRPA-211ENST00000601545 DPP7Q9UHL4 492 aa23.06■■□□□ 1.28
SNRPA-211ENST00000601545 CCDC195A0A1B0GUA6 201 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 K7ENM7 598 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 TGM5O43548 720 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 TBCAO75347 108 aaKnown RBP23.05■■□□□ 1.28
SNRPA-211ENST00000601545 HSP90AA1P07900 732 aaKnown RBP23.05■■□□□ 1.28
SNRPA-211ENST00000601545 SOX4Q06945 474 aaPredicted RBP23.05■■□□□ 1.28
SNRPA-211ENST00000601545 NOLC1Q14978 699 aaKnown RBP eCLIP23.05■■□□□ 1.28
SNRPA-211ENST00000601545 SLC39A14Q15043 492 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 UPP1Q16831 310 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 ELMSAN1Q6PJG2 1045 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 DYMQ7RTS9 669 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 KRI1Q8N9T8 703 aaKnown RBP23.05■■□□□ 1.28
SNRPA-211ENST00000601545 LNX1Q8TBB1 728 aaPredicted RBP23.05■■□□□ 1.28
SNRPA-211ENST00000601545 SNX27Q96L92 541 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 SLC38A7Q9NVC3 462 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 TFIP11Q9UBB9 837 aaKnown RBP23.05■■□□□ 1.28
SNRPA-211ENST00000601545 TBX20Q9UMR3 447 aa23.05■■□□□ 1.28
SNRPA-211ENST00000601545 I3L4J1 428 aa23.04■■□□□ 1.28
SNRPA-211ENST00000601545 RFPL2O75678 378 aa23.04■■□□□ 1.28
SNRPA-211ENST00000601545 NMT1P30419 496 aaKnown RBP23.04■■□□□ 1.28
SNRPA-211ENST00000601545 TXLNAP40222 546 aa23.04■■□□□ 1.28
SNRPA-211ENST00000601545 LIG4P49917 911 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms