RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 NXPE3Q969Y0 559 aa18.7■□□□□ 0.58
SCAF1-204ENST00000601038 CLSTN3Q9BQT9 956 aa18.7■□□□□ 0.58
SCAF1-204ENST00000601038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCAF1-204ENST00000601038 CACNA1HO95180 2353 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 H0Y858 1186 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 PSMD5Q16401 504 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 PDXDC1Q6P996 788 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 MYADMQ96S97 322 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 FAM86C1Q9NVL1 165 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 FBXW11Q9UKB1 542 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 FBXL21Q9UKT6 434 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 TNFSF13BQ9Y275 285 aa18.69■□□□□ 0.58
SCAF1-204ENST00000601038 CCDC169A6NNP5 214 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 E9PMD0 336 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 TMEM189-UBE2V1I3L0A0 370 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 NPTX2P47972 431 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 PEX3P56589 373 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 IL17AQ16552 155 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 FLCNQ8NFG4 579 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 RSAD2Q8WXG1 361 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 PPP1R10Q96QC0 940 aaKnown RBP18.68■□□□□ 0.58
SCAF1-204ENST00000601038 TMEM134Q9H6X4 195 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.68■□□□□ 0.58
SCAF1-204ENST00000601038 WNT16Q9UBV4 365 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 KIF3AQ9Y496 699 aa18.68■□□□□ 0.58
SCAF1-204ENST00000601038 DOCK8Q8NF50 2099 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 PP2D1A8MPX8 630 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 B3GAT3O94766 335 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 HNRNPA1P09651 372 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCAF1-204ENST00000601038 LAMP2P13473 410 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 NPR3P17342 541 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 DMP1Q13316 513 aaPredicted RBP18.67■□□□□ 0.58
SCAF1-204ENST00000601038 GLRA4Q5JXX5 417 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 CWF19L1Q69YN2 538 aaKnown RBP18.67■□□□□ 0.58
SCAF1-204ENST00000601038 DCLRE1AQ6PJP8 1040 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.67■□□□□ 0.58
SCAF1-204ENST00000601038 DTHD1Q6ZMT9 781 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 C1orf186Q6ZWK4 172 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 DAW1Q8N136 415 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 SLC44A3Q8N4M1 653 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 DRC1Q96MC2 740 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 UROC1Q96N76 676 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 ACO2Q99798 780 aaKnown RBP18.67■□□□□ 0.58
SCAF1-204ENST00000601038 C17orf75Q9HAS0 396 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 PTPRHQ9HD43 1115 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 ARHGAP28Q9P2N2 729 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
SCAF1-204ENST00000601038 PHLPP2Q6ZVD8 1323 aa18.67■□□□□ 0.58
SCAF1-204ENST00000601038 SMIM28A0A1B0GU29 152 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 NARSO43776 548 aaKnown RBP18.66■□□□□ 0.58
SCAF1-204ENST00000601038 HIP1RO75146 1068 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 AOC1P19801 751 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 FGFR3P22607 806 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 CDC25AP30304 524 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 GRM5P41594 1212 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 RABEP1Q15276 862 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 UPP1Q16831 310 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 RILPL1Q5EBL4 403 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 LIN9Q5TKA1 542 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 RINT1Q6NUQ1 792 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 ALKAL1Q6UXT8 129 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 SIX5Q8N196 739 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 MMTAG2Q9BU76 263 aaKnown RBP18.66■□□□□ 0.58
SCAF1-204ENST00000601038 RUSC1Q9BVN2 902 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 CCDC94Q9BW85 323 aaPredicted RBP18.66■□□□□ 0.58
SCAF1-204ENST00000601038 MRPL4Q9BYD3 311 aaKnown RBP18.66■□□□□ 0.58
SCAF1-204ENST00000601038 KMT5AQ9NQR1 393 aa18.66■□□□□ 0.58
SCAF1-204ENST00000601038 TOPORSQ9NS56 1045 aaPredicted RBP18.66■□□□□ 0.58
SCAF1-204ENST00000601038 ZFP37Q9Y6Q3 630 aaPredicted RBP18.66■□□□□ 0.58
SCAF1-204ENST00000601038 TRIP11Q15643 1979 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 PROB1E7EW31 1015 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 ANHXE9PGG2 379 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 ADAM12O43184 909 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 TRAPPC3O43617 180 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 C8AP07357 584 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 SRFP11831 508 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 HOXA9P31269 272 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 CLCNKBP51801 687 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 YARSP54577 528 aaKnown RBP18.65■□□□□ 0.58
SCAF1-204ENST00000601038 MAPK7Q13164 816 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 RAB33AQ14088 237 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 UVSSAQ2YD98 709 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 XKR4Q5GH76 650 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 PPM1LQ5SGD2 360 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 MCTP1Q6DN14 999 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 CD300LGQ6UXG3 332 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 GET4Q7L5D6 327 aaPredicted RBP18.65■□□□□ 0.58
SCAF1-204ENST00000601038 TAS1R3Q7RTX0 852 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 KCNK18Q7Z418 384 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 RTP3Q9BQQ7 232 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 NTPCRQ9BSD7 190 aaKnown RBP18.65■□□□□ 0.58
SCAF1-204ENST00000601038 TIPINQ9BVW5 301 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 CDT1Q9H211 546 aa18.65■□□□□ 0.58
SCAF1-204ENST00000601038 VWA8A3KMH1 1905 aa18.64■□□□□ 0.58
SCAF1-204ENST00000601038 DOCK6Q96HP0 2047 aa18.64■□□□□ 0.58
SCAF1-204ENST00000601038 PI15O43692 258 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 ST18O60284 1047 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 GFRA3O60609 400 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 CFHP08603 1231 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 FSHRP23945 695 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms