RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 VAMP7P51809 220 aa22.21■■□□□ 1.15
PNKP-215ENST00000600910 PSMD6Q15008 389 aa22.21■■□□□ 1.15
PNKP-215ENST00000600910 TMEM240Q5SV17 173 aa22.21■■□□□ 1.15
PNKP-215ENST00000600910 SNX27Q96L92 541 aa22.21■■□□□ 1.15
PNKP-215ENST00000600910 ELAC1Q9H777 363 aaKnown RBP22.21■■□□□ 1.15
PNKP-215ENST00000600910 PCDHB7Q9Y5E2 793 aa22.21■■□□□ 1.15
PNKP-215ENST00000600910 CITO14578 2027 aa22.21■■□□□ 1.15
PNKP-215ENST00000600910 TTC26A0AVF1 554 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 LACTBL1A8MY62 500 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 MTIF2P46199 727 aaKnown RBP22.2■■□□□ 1.15
PNKP-215ENST00000600910 RGS19P49795 217 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 WDR5P61964 334 aaKnown RBP22.2■■□□□ 1.15
PNKP-215ENST00000600910 DLG4P78352 724 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 PPP2R3AQ06190 1150 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 SPAG1Q07617 926 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 DCAF17Q5H9S7 520 aaPredicted RBP22.2■■□□□ 1.15
PNKP-215ENST00000600910 TRIM59Q8IWR1 403 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 PARD3BQ8TEW8 1205 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 CXCL16Q9H2A7 254 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 RSAD1Q9HA92 442 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 PLEKHA5Q9HAU0 1116 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 GIT1Q9Y2X7 761 aa22.2■■□□□ 1.15
PNKP-215ENST00000600910 IL18RAPO95256 599 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 DLATP10515 647 aaKnown RBP22.2■■□□□ 1.14
PNKP-215ENST00000600910 MLH1P40692 756 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 MAGEA10P43363 369 aaPredicted RBP22.2■■□□□ 1.14
PNKP-215ENST00000600910 ALKAL1Q6UXT8 129 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 TMC2Q8TDI7 906 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 FNBP1Q96RU3 617 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 POP1Q99575 1024 aaKnown RBP22.2■■□□□ 1.14
PNKP-215ENST00000600910 UBN1Q9NPG3 1134 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 LRFN2Q9ULH4 789 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 TTC3P53804 2025 aa22.2■■□□□ 1.14
PNKP-215ENST00000600910 ANK1P16157 1881 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 LRRIQ3A6PVS8 624 aaPredicted RBP22.19■■□□□ 1.14
PNKP-215ENST00000600910 ZBBXA8MT70 800 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 AMHP03971 560 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 TRIM49P0CI25 452 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 TRIM49CP0CI26 452 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 DEFB103AP81534 67 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 KRT31Q15323 416 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 TCERG1LQ5VWI1 586 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 USP37Q86T82 979 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 NPAS4Q8IUM7 802 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 CRIPAKQ8N1N5 446 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 ZFP42Q96MM3 310 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 GAD1Q99259 594 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 TUBGCP2Q9BSJ2 902 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 ASB7Q9H672 318 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 RNF19AQ9NV58 838 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 CNTN3Q9P232 1028 aa22.19■■□□□ 1.14
PNKP-215ENST00000600910 RALGAPA2Q2PPJ7 1873 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 ARL5CA6NH57 179 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 FGFR1P11362 822 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 KCNJ6P48051 423 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 SURF1Q15526 300 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 XKR4Q5GH76 650 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 CD302Q8IX05 232 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 ANKRD20A12PQ8NF67 263 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 SLC35C1Q96A29 364 aa22.18■■□□□ 1.14
PNKP-215ENST00000600910 RNF216Q9NWF9 866 aaPredicted RBP22.18■■□□□ 1.14
PNKP-215ENST00000600910 LIMA1Q9UHB6 759 aaKnown RBP22.18■■□□□ 1.14
PNKP-215ENST00000600910 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.18■■□□□ 1.14
PNKP-215ENST00000600910 PTPRJQ12913 1337 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 TNRC18O15417 2968 aaPredicted RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 UPP2O95045 317 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 PRKCSHP14314 528 aaPredicted RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 TNNI1P19237 187 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 AFF1P51825 1210 aaKnown RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 MCCD1P59942 119 aaPredicted RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 ENPEPQ07075 957 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 GLRA4Q5JXX5 417 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 CLLU1OSQ5K130 101 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 C1orf220Q5T0J3 134 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 LMBRD2Q68DH5 695 aaPredicted RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 JADE1Q6IE81 842 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 HERVK_113Q902F9 699 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 ZMAT2Q96NC0 199 aaKnown RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 CGRRF1Q99675 332 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 TAB2Q9NYJ8 693 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 TRIP11Q15643 1979 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 OFD1O75665 1012 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 NFICP08651 508 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 CLDN10P78369 228 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 MAN2A1Q16706 1144 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 APTXQ7Z2E3 356 aaKnown RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 WDR49Q8IV35 697 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 EFCAB13Q8IY85 973 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 GSTCDQ8NEC7 633 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 HELQQ8TDG4 1101 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 TOP1MTQ969P6 601 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 RPS6KC1Q96S38 1066 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 CXXC1Q9P0U4 656 aaPredicted RBP22.17■■□□□ 1.14
PNKP-215ENST00000600910 INPP5FQ9Y2H2 1132 aa22.17■■□□□ 1.14
PNKP-215ENST00000600910 SMIM28A0A1B0GU29 152 aa22.16■■□□□ 1.14
PNKP-215ENST00000600910 PTGESO14684 152 aa22.16■■□□□ 1.14
PNKP-215ENST00000600910 GLB1LQ6UWU2 654 aa22.16■■□□□ 1.14
PNKP-215ENST00000600910 TMCO2Q7Z6W1 182 aaPredicted RBP22.16■■□□□ 1.14
PNKP-215ENST00000600910 KIF12Q96FN5 646 aa22.16■■□□□ 1.14
PNKP-215ENST00000600910 FAM84AQ96KN4 292 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms