RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 PAX3P23760 479 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 RPL9P32969 192 aaKnown RBP8.39□□□□□ -1.07
FKRP-220ENST00000600646 UBE2HP62256 183 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 CREMQ03060 361 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 ADGRE1Q14246 886 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 SURF1Q15526 300 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 ARMCX5Q6P1M9 558 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 PDXDC1Q6P996 788 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 DDX53Q86TM3 631 aaKnown RBP8.39□□□□□ -1.07
FKRP-220ENST00000600646 NT5DC4Q86YG4 428 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 ZNF280BQ86YH2 543 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 COLGALT2Q8IYK4 626 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 ZNF507Q8TCN5 953 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 NOC3LQ8WTT2 800 aaKnown RBP8.39□□□□□ -1.07
FKRP-220ENST00000600646 FAM212AQ96EL1 285 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 ZBTB45Q96K62 511 aaPredicted RBP8.39□□□□□ -1.07
FKRP-220ENST00000600646 CDCA3Q99618 268 aaPredicted RBP8.39□□□□□ -1.07
FKRP-220ENST00000600646 TCF25Q9BQ70 676 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 EMILIN2Q9BXX0 1053 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 TLE6Q9H808 572 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 DPP7Q9UHL4 492 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 RANBP2P49792 3224 aaKnown RBP8.39□□□□□ -1.07
FKRP-220ENST00000600646 TDRD15B5MCY1 1934 aaKnown RBP8.39□□□□□ -1.07
FKRP-220ENST00000600646 TCHHQ07283 1943 aa8.39□□□□□ -1.07
FKRP-220ENST00000600646 SF3B1O75533 1304 aaKnown RBP eCLIP8.38□□□□□ -1.072e-7■■■■■ 53.5
FKRP-220ENST00000600646 SMIM28A0A1B0GU29 152 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 ARHGEF37A1IGU5 675 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 PPP1R37O75864 691 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 PRPF6O94906 941 aaKnown RBP8.38□□□□□ -1.07
FKRP-220ENST00000600646 CSPG5O95196 566 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 IL18RAPO95256 599 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 CXCL14O95715 111 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 EDN1P05305 212 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 URODP06132 367 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 LINC00271P0C7V0 271 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 MYBP10242 640 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 KCNE1P15382 129 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 CYP3A5P20815 502 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 PPP1R2P41236 205 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 SLC11A1P49279 550 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 DSC1Q08554 894 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 STIM1Q13586 685 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 USP41Q3LFD5 358 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 DCLRE1AQ6PJP8 1040 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 EP400NLQ6ZTU2 488 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 SPRED2Q7Z698 418 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 USP37Q86T82 979 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 PPFIBP1Q86W92 1011 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 ELOA2Q8IYF1 753 aaPredicted RBP8.38□□□□□ -1.07
FKRP-220ENST00000600646 VPS52Q8N1B4 723 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 GPD1LQ8N335 351 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 BEST2Q8NFU1 509 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 CACTINQ8WUQ7 758 aaKnown RBP8.38□□□□□ -1.07
FKRP-220ENST00000600646 HLA-CQ95604 372 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 SMARCE1Q969G3 411 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 CHAMP1Q96JM3 812 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 SNX27Q96L92 541 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 FIZ1Q96SL8 496 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 STRA6Q9BX79 667 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 ASB7Q9H672 318 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 SLC39A2Q9NP94 309 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 MRPL17Q9NRX2 175 aaKnown RBP8.38□□□□□ -1.07
FKRP-220ENST00000600646 MIOSQ9NXC5 875 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 CNTN3Q9P232 1028 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 DNAJB4Q9UDY4 337 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 ADAM28Q9UKQ2 775 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 UBQLN1Q9UMX0 589 aaKnown RBP8.38□□□□□ -1.07
FKRP-220ENST00000600646 FAM50BQ9Y247 325 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 PRG3Q9Y2Y8 225 aaPredicted RBP8.38□□□□□ -1.07
FKRP-220ENST00000600646 DERAQ9Y315 318 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 NUB1Q9Y5A7 615 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 STYXL1Q9Y6J8 313 aa8.38□□□□□ -1.07
FKRP-220ENST00000600646 COL4A4P53420 1690 aaPredicted RBP8.37□□□□□ -1.07
FKRP-220ENST00000600646 CASTOR2A6NHX0 329 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 ZNF233A6NK53 670 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 ANKRD63C9JTQ0 380 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 PTGESO14684 152 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 CALUO43852 315 aaPredicted RBP8.37□□□□□ -1.07
FKRP-220ENST00000600646 EXTL3O43909 919 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 PRPF40AO75400 957 aaKnown RBP8.37□□□□□ -1.07
FKRP-220ENST00000600646 B3GAT3O94766 335 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 RHOBTB3O94955 611 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 SOD2P04179 222 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 CTSAP10619 480 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 RPL13P26373 211 aaKnown RBP8.37□□□□□ -1.07
FKRP-220ENST00000600646 PBX3P40426 434 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 ACOT2P49753 483 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 KCNB1Q14721 858 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 KNOP1Q1ED39 458 aaKnown RBP8.37□□□□□ -1.07
FKRP-220ENST00000600646 SLC10A6Q3KNW5 377 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 XKR4Q5GH76 650 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 GLRA4Q5JXX5 417 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 PLPP4Q5VZY2 271 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 ALKAL1Q6UXT8 129 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 GRAMD1CQ8IYS0 662 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 FMR1NBQ8N0W7 255 aaPredicted RBP8.37□□□□□ -1.07
FKRP-220ENST00000600646 CEP120Q8N960 986 aa8.37□□□□□ -1.07
FKRP-220ENST00000600646 GSTCDQ8NEC7 633 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms