RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CEBPBP17676 345 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 CCNE1P24864 410 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 MCM5P33992 734 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 SOWAHCQ53LP3 525 aaPredicted RBP19.67■□□□□ 0.74
SSBP4-207ENST00000600244 WDR44Q5JSH3 913 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 FAM78AQ5JUQ0 283 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 RNF43Q68DV7 783 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 SCNM1Q9BWG6 230 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 SMOC1Q9H4F8 434 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 RBM12Q9NTZ6 932 aaKnown RBP19.67■□□□□ 0.74
SSBP4-207ENST00000600244 PCDHGA5Q9Y5G8 931 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 WDFY3Q8IZQ1 3526 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 ITPR1Q14643 2758 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 CHMP2AO43633 222 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 FAM171A1Q5VUB5 890 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 CACNA2D4Q7Z3S7 1137 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 KBTBD6Q86V97 674 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 RDM1Q8NG50 284 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 PRPF31Q8WWY3 499 aaKnown RBP19.66■□□□□ 0.74
SSBP4-207ENST00000600244 SLC5A5Q92911 643 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 JPH2Q9BR39 696 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-207ENST00000600244 PAAF1Q9BRP4 392 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 CACNG4Q9UBN1 327 aa19.66■□□□□ 0.74
SSBP4-207ENST00000600244 ARNTLO00327 626 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 ZIC2O95409 532 aaPredicted RBP19.65■□□□□ 0.74
SSBP4-207ENST00000600244 SRGAP2CP0DJJ0 459 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 PSMC3P17980 439 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 GDI1P31150 447 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 LRRC32Q14392 662 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 HSP90AA2PQ14568 343 aaPredicted RBP19.65■□□□□ 0.74
SSBP4-207ENST00000600244 PRSS36Q5K4E3 855 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 VITQ6UXI7 678 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 Q6ZS52 159 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 ANO5Q75V66 913 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 MICU3Q86XE3 530 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 GAB3Q8WWW8 586 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 CCDC51Q96ER9 411 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 ASB16Q96NS5 453 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 VPS45Q9NRW7 570 aa19.65■□□□□ 0.74
SSBP4-207ENST00000600244 TICRRQ7Z2Z1 1910 aa19.64■□□□□ 0.74
SSBP4-207ENST00000600244 DDX11L8A8MPP1 907 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 GAS7O60861 476 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 AXLP30530 894 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 OR1D2P34982 312 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 GRIK3Q13003 919 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 B3GNT9Q6UX72 402 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 SGMS1Q86VZ5 419 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 CEP57Q86XR8 500 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 CSRNP2Q9H175 543 aa19.64■□□□□ 0.73
SSBP4-207ENST00000600244 LAMA1P25391 3075 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 TSPAN1O60635 241 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 PSMD10O75832 226 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 MICAL2O94851 1124 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 PTPN2P17706 415 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 MPLP40238 635 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 LAMTOR4Q0VGL1 99 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 SH3PXD2AQ5TCZ1 1133 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 TCEAL6Q6IPX3 200 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 PDXDC1Q6P996 788 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 TCEAL3Q969E4 200 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 GJA10Q969M2 543 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 TCEAL4Q96EI5 215 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 ZC3H10Q96K80 434 aaKnown RBP19.63■□□□□ 0.73
SSBP4-207ENST00000600244 APOL6Q9BWW8 343 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 TEKT3Q9BXF9 490 aa19.63■□□□□ 0.73
SSBP4-207ENST00000600244 RBM28Q9NW13 759 aaKnown RBP19.63■□□□□ 0.73
SSBP4-207ENST00000600244 HELZ2Q9BYK8 2649 aaKnown RBP19.63■□□□□ 0.73
SSBP4-207ENST00000600244 ESYT2A0FGR8 921 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 C4orf47A7E2U8 309 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 RPP40O75818 363 aaKnown RBP19.62■□□□□ 0.73
SSBP4-207ENST00000600244 CEACAM1P13688 526 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 AKAP5P24588 427 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 DGKKQ5KSL6 1271 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 LRCH2Q5VUJ6 765 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 NOTUMQ6P988 496 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 C1orf228Q6PIY5 440 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 MIER3Q7Z3K6 550 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 HASPINQ8TF76 798 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 DEPDC1BQ8WUY9 529 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 MSANTD3Q96H12 275 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 ZMYND12Q9H0C1 365 aa19.62■□□□□ 0.73
SSBP4-207ENST00000600244 NXF3Q9H4D5 531 aaKnown RBP19.62■□□□□ 0.73
SSBP4-207ENST00000600244 SMG1Q96Q15 3661 aaKnown RBP19.62■□□□□ 0.73
SSBP4-207ENST00000600244 ZMYM2Q9UBW7 1377 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 CCDC163A0A0D9SF12 145 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 ARHGEF37A1IGU5 675 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 WDR27A2RRH5 827 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 ERLIN2O94905 339 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 KIF4AO95239 1232 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 CHMLP26374 656 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 PCBP1Q15365 356 aaKnown RBP eCLIP19.61■□□□□ 0.735e-7■■■□□ 17.8
SSBP4-207ENST00000600244 PLA2G4FQ68DD2 849 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 ZNF579Q8NAF0 562 aaKnown RBP19.61■□□□□ 0.73
SSBP4-207ENST00000600244 RUFY2Q8WXA3 655 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 PSPC1Q8WXF1 523 aaKnown RBP19.61■□□□□ 0.73
SSBP4-207ENST00000600244 SMARCD2Q92925 531 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 TMEM143Q96AN5 459 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 KIF12Q96FN5 646 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 CPB2Q96IY4 423 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 ZSWIM3Q96MP5 696 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms