RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 MLH1P40692 756 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 AFF1P51825 1210 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 MARSP56192 900 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 CYP24A1Q07973 514 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 PSMD6Q15008 389 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 CEP135Q66GS9 1140 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 CD302Q8IX05 232 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 FAM186BQ8IYM0 893 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 RDH13Q8NBN7 331 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 NOC3LQ8WTT2 800 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 RSPH1Q8WYR4 309 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 RNPC3Q96LT9 517 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 CASD1Q96PB1 797 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 GAD1Q99259 594 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 ANP32EQ9BTT0 268 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 TMEM117Q9H0C3 514 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 HSD3B7Q9H2F3 369 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 ASB7Q9H672 318 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 CBX8Q9HC52 389 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 KLK14Q9P0G3 267 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 CNTN3Q9P232 1028 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 LRFN2Q9ULH4 789 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 FRMD4BQ9Y2L6 1034 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 NFE2L3Q9Y4A8 694 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 ARL5CA6NH57 179 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 IL18RAPO95256 599 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 GJB5O95377 273 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 GNA14O95837 355 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 EPB41P11171 864 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 ZNF18P17022 549 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 IBSPP21815 317 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 GATMP50440 423 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 CLDN10P78369 228 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 HTRA4P83105 476 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 CDKAL1Q5VV42 579 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 GLB1LQ6UWU2 654 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 INTS8Q75QN2 995 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 HERC6Q8IVU3 1022 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 FAM200AQ8TCP9 573 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 HELQQ8TDG4 1101 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 TMC2Q8TDI7 906 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 PARD3BQ8TEW8 1205 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 ZFP42Q96MM3 310 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 ZMAT2Q96NC0 199 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 TSPAN18Q96SJ8 248 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 SAMSN1Q9NSI8 373 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 COL4A6Q14031 1691 aa13.74□□□□□ -0.21
CHMP2A-206ENST00000600118 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 UPP2O95045 317 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 ATP2A2P16615 1042 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 PPP2R3AQ06190 1150 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 SURF1Q15526 300 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 NAB2Q15742 525 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 NOMO2Q5JPE7 1267 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 EFCAB13Q8IY85 973 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 PPP1R10Q96QC0 940 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 FANCLQ9NW38 375 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 ARMCX3Q9UH62 379 aaPredicted RBP13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 PLAGL2Q9UPG8 496 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 DERAQ9Y315 318 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 C2CD2Q9Y426 696 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 PDE4DIPQ5VU43 2346 aa13.73□□□□□ -0.21
CHMP2A-206ENST00000600118 PTPRJQ12913 1337 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 NFICP08651 508 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 SCNN1GP51170 649 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 VAMP7P51809 220 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 BFSP1Q12934 665 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 FAM109BQ6ICB4 259 aaPredicted RBP13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 LUZP1Q86V48 1076 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 TRIM59Q8IWR1 403 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 CCDC127Q96BQ5 260 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 CNOT6LQ96LI5 555 aaKnown RBP13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 CGRRF1Q99675 332 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 TBC1D13Q9NVG8 400 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
CHMP2A-206ENST00000600118 LRRIQ3A6PVS8 624 aaPredicted RBP13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 TBKBP1A7MCY6 615 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 KRT13P13646 458 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 CYP3A5P20815 502 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 DLG4P78352 724 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 SPAG1Q07617 926 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 DSC1Q08554 894 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms