RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 SLC9A9Q8IVB4 645 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 MYCBPQ99417 103 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 SYT11Q9BT88 431 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 NKIRAS1Q9NYS0 192 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 CD58P19256 250 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 GBP2P32456 591 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 CHKAP35790 457 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 PEX5P50542 639 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 RPS6P62753 249 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 SV2AQ7L0J3 742 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 FAM71AQ8IYT1 594 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 ZKSCAN4Q969J2 545 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 EPB41L4BQ9H329 900 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 FEM1BQ9UK73 627 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 GTF3C4Q9UKN8 822 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 POC1B-GALNT4F8VUJ3 575 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 PI4K2BG5E9Z4 385 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 IFNB1P01574 187 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 NPTX2P47972 431 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 CDR2Q01850 454 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 CROCCP2Q86T23 111 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 KIF2BQ8N4N8 673 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 KCTD17Q8N5Z5 321 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 ZNF277Q9NRM2 450 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 PCYOX1Q9UHG3 505 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 TBX20Q9UMR3 447 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
ARHGEF1-219ENST00000599846 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 GZMAP12544 262 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 MMP13P45452 471 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 ACOT2P49753 483 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 SPOPLQ6IQ16 392 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 TRPM8Q7Z2W7 1104 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 ABCF3Q9NUQ8 709 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 GABBR1Q9UBS5 961 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 SEPT9Q9UHD8 586 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 TPX2Q9ULW0 747 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 GJB6O95452 261 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 MTM1Q13496 603 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 ALCAMQ13740 583 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 EXOC3L1Q86VI1 746 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 PARD3BQ8TEW8 1205 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 CCDC77Q9BR77 488 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 ANKFY1Q9P2R3 1169 aa16.9■□□□□ 0.3
ARHGEF1-219ENST00000599846 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 POTEJP0CG39 1038 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 SPDYE6P0CI01 402 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 RALAP11233 206 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 LIG4P49917 911 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 TMED2Q15363 201 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 NFIL3Q16649 462 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 CNKSR1Q969H4 720 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 NCAPGQ9BPX3 1015 aa16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 TACO1Q9BSH4 297 aaKnown RBP16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.3
ARHGEF1-219ENST00000599846 GGPS1O95749 300 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 CTNNA2P26232 953 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 DRG2P55039 364 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 PSMC5P62195 406 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 C1orf220Q5T0J3 134 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 C3orf20Q8ND61 904 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 CCT6BQ92526 530 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 VTI1AQ96AJ9 217 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 TCHPQ9BT92 498 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 AGO4Q9HCK5 861 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 UVRAGQ9P2Y5 699 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 ZNF148Q9UQR1 794 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 YDJCA8MPS7 323 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 ECM2O94769 699 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 ZNF394Q53GI3 561 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 ACAD10Q6JQN1 1059 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 TMEM270Q6UE05 265 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 PCDHB4Q9Y5E5 795 aa16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 ATXN2Q99700 1313 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-219ENST00000599846 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 P4HA2O15460 535 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 SUN1O94901 812 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 ASNSP08243 561 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 ADSSP30520 456 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 CAP2P40123 477 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 PIK3CAP42336 1068 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 MTERF2Q49AM1 385 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 SWSAP1Q6NVH7 229 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 KLHL29Q96CT2 875 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 MRIQ9BWK5 157 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 TMEM8AQ9HCN3 771 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 GGA2Q9UJY4 613 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 SRRM3A6NNA2 597 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 WDR64B1ANS9 1081 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 SPAG7O75391 227 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 RASSF9O75901 435 aa16.88■□□□□ 0.29
ARHGEF1-219ENST00000599846 GH1P01241 217 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms