RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 PARP2Q9UGN5 583 aa14.05□□□□□ -0.16
SH2D3A-208ENST00000599563 DPP7Q9UHL4 492 aa14.05□□□□□ -0.16
SH2D3A-208ENST00000599563 USP25Q9UHP3 1055 aa14.05□□□□□ -0.16
SH2D3A-208ENST00000599563 USP15Q9Y4E8 981 aaPredicted RBP14.05□□□□□ -0.16
SH2D3A-208ENST00000599563 HCFC2Q9Y5Z7 792 aa14.05□□□□□ -0.16
SH2D3A-208ENST00000599563 CITO14578 2027 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 CCDC169A6NNP5 214 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 H0YCG3 227 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 KLRC4O43908 158 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 CLASP2O75122 1294 aaKnown RBP14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 HIP1RO75146 1068 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 MBD3O95983 291 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 SOD2P04179 222 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 URODP06132 367 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 NPTX2P47972 431 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 AFF1P51825 1210 aaKnown RBP14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 PEX3P56589 373 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 ITIH3Q06033 890 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 POSTNQ15063 836 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 ATF7IP2Q5U623 682 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 GPR65Q8IYL9 337 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 VN1R2Q8NFZ6 395 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 C7orf25Q9BPX7 421 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 MRPL4Q9BYD3 311 aaKnown RBP14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 MAGEF1Q9HAY2 307 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 CD320Q9NPF0 282 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 KMT5AQ9NQR1 393 aa14.04□□□□□ -0.16
SH2D3A-208ENST00000599563 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 DCXO43602 365 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 B4GALT3O60512 393 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 C1RP00736 705 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 AKAP5P24588 427 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 CREMQ03060 361 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 DPYDQ12882 1025 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 TUSC3Q13454 348 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 CBX2Q14781 532 aaPredicted RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 PTPN14Q15678 1187 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 KIAA1841Q6NSI8 718 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 LLGL2Q6P1M3 1020 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 CDR2LQ86X02 465 aaPredicted RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 BCL7CQ8WUZ0 217 aaPredicted RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 SPIRE2Q8WWL2 714 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 SUSD6Q92537 303 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 RIPOR3Q96MK2 946 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 NTPCRQ9BSD7 190 aaKnown RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 HERC2P3Q9BVR0 1158 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 NUP62CLQ9H1M0 184 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 TOPORSQ9NS56 1045 aaPredicted RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 LARSQ9P2J5 1176 aaKnown RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 ARHGAP28Q9P2N2 729 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 TNFSF13BQ9Y275 285 aa14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 PRG3Q9Y2Y8 225 aaPredicted RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 PDCD11Q14690 1871 aaKnown RBP14.03□□□□□ -0.16
SH2D3A-208ENST00000599563 GPR37L1O60883 481 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 KRT18P05783 430 aaKnown RBP14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 THP07101 528 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 ADH1AP07327 375 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 ABCD1P33897 745 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 MTHFRP42898 656 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 GLUD2P49448 558 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 ASIC1P78348 528 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 STRN3Q13033 797 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 TMEM31Q5JXX7 168 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 CAVIN1Q6NZI2 390 aaKnown RBP14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 GSTCDQ8NEC7 633 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 HPS3Q969F9 1004 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 FGFBP2Q9BYJ0 223 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 S1PR5Q9H228 398 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 ADAM7Q9H2U9 754 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 ADAM28Q9UKQ2 775 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 ODF2LQ9ULJ1 636 aa14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 MTCL1Q9Y4B5 1905 aaKnown RBP14.02□□□□□ -0.17
SH2D3A-208ENST00000599563 SF3B1O75533 1304 aaKnown RBP eCLIP14.01□□□□□ -0.176e-13■■■■■ 155.1
SH2D3A-208ENST00000599563 FRMD3A2A2Y4 597 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 LOC730098B7Z3J9 87 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 TRAK2O60296 914 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 RECQL4O94761 1208 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 PLS3P13797 630 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 IDEP14735 1019 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 PTMSP20962 102 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 KLRC2P26717 231 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 YARSP54577 528 aaKnown RBP14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 ELAVL2Q12926 359 aaKnown RBP14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 HSP90AA2PQ14568 343 aaPredicted RBP14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 USP41Q3LFD5 358 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 NT5DC1Q5TFE4 455 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 SYCE2Q6PIF2 218 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 SFR1Q86XK3 245 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 SLC22A17Q8WUG5 538 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 AUTS2Q8WXX7 1259 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 KIFC3Q9BVG8 833 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 VN1R3Q9BXE9 311 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 ZHX3Q9H4I2 956 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 EPHX3Q9H6B9 360 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 MARCH5Q9NX47 278 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 MIOSQ9NXC5 875 aa14.01□□□□□ -0.17
SH2D3A-208ENST00000599563 SNTG2Q9NY99 539 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms