RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 DTHD1Q6ZMT9 781 aa20.6■□□□□ 0.89
PNKP-213ENST00000599543 CEP57Q86XR8 500 aa20.6■□□□□ 0.89
PNKP-213ENST00000599543 TTPALQ9BTX7 342 aa20.6■□□□□ 0.89
PNKP-213ENST00000599543 MFSD1Q9H3U5 465 aa20.6■□□□□ 0.89
PNKP-213ENST00000599543 PIDD1Q9HB75 910 aa20.6■□□□□ 0.89
PNKP-213ENST00000599543 PHLPP2Q6ZVD8 1323 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 CCDC169A6NNP5 214 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 PP2D1A8MPX8 630 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 E9PMD0 336 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 PEX3P56589 373 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 ELAVL2Q12926 359 aaKnown RBP20.59■□□□□ 0.89
PNKP-213ENST00000599543 TDGQ13569 410 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 FAM171A1Q5VUB5 890 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 PRSS55Q6UWB4 352 aaPredicted RBP20.59■□□□□ 0.89
PNKP-213ENST00000599543 DRC1Q96MC2 740 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 KCNK12Q9HB15 430 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 ZDHHC7Q9NXF8 308 aa20.59■□□□□ 0.89
PNKP-213ENST00000599543 HIP1RO75146 1068 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 NUBP1P53384 320 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 NAB2Q15742 525 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 RILPL1Q5EBL4 403 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 GLRA4Q5JXX5 417 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 NT5DC1Q5TFE4 455 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 PIK3R5Q8WYR1 880 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 ZNF707Q96C28 371 aaPredicted RBP20.58■□□□□ 0.89
PNKP-213ENST00000599543 INTS4Q96HW7 963 aaKnown RBP20.58■□□□□ 0.89
PNKP-213ENST00000599543 NT5C3AQ9H0P0 336 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 CXCL16Q9H2A7 254 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.58■□□□□ 0.89
PNKP-213ENST00000599543 IGSF9Q9P2J2 1179 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 TNFSF13BQ9Y275 285 aa20.58■□□□□ 0.89
PNKP-213ENST00000599543 N4BP1O75113 896 aaKnown RBP20.57■□□□□ 0.88
PNKP-213ENST00000599543 HSP90AA1P07900 732 aaKnown RBP20.57■□□□□ 0.88
PNKP-213ENST00000599543 SYT1P21579 422 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 CDC25AP30304 524 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 NPTX2P47972 431 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 ZRSR1Q15695 479 aaKnown RBP20.57■□□□□ 0.88
PNKP-213ENST00000599543 PSMD5Q16401 504 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 IL17AQ16552 155 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 ZNF568Q3ZCX4 644 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 PDXDC1Q6P996 788 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 LILRA6Q6PI73 481 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 DOCK6Q96HP0 2047 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 RUSC1Q9BVN2 902 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 IRF2BPLQ9H1B7 796 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 DUSP12Q9UNI6 340 aa20.57■□□□□ 0.88
PNKP-213ENST00000599543 DMDP11532 3685 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 PAPLNO95428 1278 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 YARSP54577 528 aaKnown RBP20.56■□□□□ 0.88
PNKP-213ENST00000599543 LIN9Q5TKA1 542 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 FOXD4L5Q5VV16 416 aaPredicted RBP20.56■□□□□ 0.88
PNKP-213ENST00000599543 FOXD4L4Q8WXT5 416 aaPredicted RBP20.56■□□□□ 0.88
PNKP-213ENST00000599543 PHOX2BQ99453 314 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 CCDC94Q9BW85 323 aaPredicted RBP20.56■□□□□ 0.88
PNKP-213ENST00000599543 MRPL4Q9BYD3 311 aaKnown RBP20.56■□□□□ 0.88
PNKP-213ENST00000599543 PRKD2Q9BZL6 878 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 C17orf75Q9HAS0 396 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 KMT5AQ9NQR1 393 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 TOPORSQ9NS56 1045 aaPredicted RBP20.56■□□□□ 0.88
PNKP-213ENST00000599543 FBXW11Q9UKB1 542 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 FBXL21Q9UKT6 434 aa20.56■□□□□ 0.88
PNKP-213ENST00000599543 ZMYND10O75800 440 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 B3GAT3O94766 335 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 ATP2C1P98194 919 aaPredicted RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 ASTLQ6HA08 431 aaPredicted RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 RINT1Q6NUQ1 792 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 GET4Q7L5D6 327 aaPredicted RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 DAW1Q8N136 415 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 LNX1Q8TBB1 728 aaPredicted RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 UROC1Q96N76 676 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 PPP1R10Q96QC0 940 aaKnown RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 ACO2Q99798 780 aaKnown RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 CLSTN3Q9BQT9 956 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 MMTAG2Q9BU76 263 aaKnown RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 TIPINQ9BVW5 301 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 TMEM134Q9H6X4 195 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.55■□□□□ 0.88
PNKP-213ENST00000599543 ARHGAP28Q9P2N2 729 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 EPS15L1Q9UBC2 864 aa20.55■□□□□ 0.88
PNKP-213ENST00000599543 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
PNKP-213ENST00000599543 PDCD11Q14690 1871 aaKnown RBP20.54■□□□□ 0.88
PNKP-213ENST00000599543 TMEM189-UBE2V1I3L0A0 370 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 GALR2O43603 387 aaPredicted RBP20.54■□□□□ 0.88
PNKP-213ENST00000599543 GRM5P41594 1212 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 CLCNKBP51801 687 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 OSTNP61366 133 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 C1orf186Q6ZWK4 172 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 KCNK18Q7Z418 384 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 TMEM105Q8N8V8 129 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 FLCNQ8NFG4 579 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 MYADMQ96S97 322 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 CDT1Q9H211 546 aa20.54■□□□□ 0.88
PNKP-213ENST00000599543 VWA3AA6NCI4 1184 aa20.53■□□□□ 0.88
PNKP-213ENST00000599543 MAPK7Q13164 816 aa20.53■□□□□ 0.88
PNKP-213ENST00000599543 UPP1Q16831 310 aa20.53■□□□□ 0.88
PNKP-213ENST00000599543 FAM173BQ6P4H8 233 aa20.53■□□□□ 0.88
PNKP-213ENST00000599543 DCLRE1AQ6PJP8 1040 aa20.53■□□□□ 0.88
PNKP-213ENST00000599543 CEP120Q8N960 986 aa20.53■□□□□ 0.88
PNKP-213ENST00000599543 RSAD2Q8WXG1 361 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms