RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 IQCA1LA6NCM1 817 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 TNNT3P45378 269 aaPredicted RBP15.56■□□□□ 0.08
VRK3-217ENST00000599538 CLCN3P51790 818 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 IER5Q5VY09 327 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 TAPT1Q6NXT6 567 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 MAMDC4Q6UXC1 1216 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 CDR2LQ86X02 465 aaPredicted RBP15.56■□□□□ 0.08
VRK3-217ENST00000599538 RHPN2Q8IUC4 686 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 KLHL7Q8IXQ5 586 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 SYCE1Q8N0S2 351 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 SHCBP1Q8NEM2 672 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 GPRC5AQ8NFJ5 357 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 PBKQ96KB5 322 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 SELENOOQ9BVL4 669 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 CTTNBP2NLQ9P2B4 639 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 AMFRQ9UKV5 643 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 TRPC6Q9Y210 931 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 NOC2LQ9Y3T9 749 aaKnown RBP15.56■□□□□ 0.08
VRK3-217ENST00000599538 CCL15-CCL14A0A0B4J2E2 113 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 CES2O00748 559 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 CLDN3O15551 220 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 ITGA4P13612 1032 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 PIK3CAP42336 1068 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 GYS2P54840 703 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 CDR2Q01850 454 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 GCNT1Q02742 428 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 ENPEPQ07075 957 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 CCL15Q16663 113 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 ZNF792Q3KQV3 632 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 ACTRT1Q8TDG2 376 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 AENQ8WTP8 325 aaKnown RBP15.56■□□□□ 0.08
VRK3-217ENST00000599538 SCFD2Q8WU76 684 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 BTBD6Q96KE9 485 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 C1orf112Q9NSG2 853 aa15.56■□□□□ 0.08
VRK3-217ENST00000599538 PLXNA1Q9UIW2 1896 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 ABLIM1O14639 778 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 B4GALT5O43286 388 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 RAD51CO43502 376 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 MCM3P25205 808 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 PDE6CP51160 858 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 GPC5P78333 572 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 ARHGAP1Q07960 439 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 TTLL4Q14679 1199 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 CDCA2Q69YH5 1023 aaPredicted RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 CCDC70Q6NSX1 233 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 PNMA8AQ86V59 439 aaPredicted RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 ALG3Q92685 438 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 NLRP4Q96MN2 994 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 ACO2Q99798 780 aaKnown RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 TCHPQ9BT92 498 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 MINDY3Q9H8M7 445 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 NR2E1Q9Y466 385 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 ALG6Q9Y672 507 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 ZC3H4Q9UPT8 1303 aaKnown RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 TMEM110-MUSTN1A8MSY1 372 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 KIAA0391O15091 583 aaKnown RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 ECM2O94769 699 aaPredicted RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 HEXIM1O94992 359 aaKnown RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 CST3P01034 146 aaPredicted RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 PRKCBP05771 671 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 CFHP08603 1231 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 GZMAP12544 262 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 MARCKSL1P49006 195 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 CARSP49589 748 aaKnown RBP15.55■□□□□ 0.08
VRK3-217ENST00000599538 IGBP1P78318 339 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 EFCAB12Q6NXP0 572 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 AADACL2Q6P093 401 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 RHOT2Q8IXI1 618 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 RASGEF1CQ8N431 466 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 CGRRF1Q99675 332 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 SMARCAD1Q9H4L7 1026 aa15.55■□□□□ 0.08
VRK3-217ENST00000599538 PLXNB2O15031 1838 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.54■□□□□ 0.08
VRK3-217ENST00000599538 ASB14A6NK59 587 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 ZC3H11AO75152 810 aaKnown RBP eCLIP15.54■□□□□ 0.08
VRK3-217ENST00000599538 CSDE1O75534 798 aaKnown RBP15.54■□□□□ 0.08
VRK3-217ENST00000599538 LDHAP00338 332 aaKnown RBP15.54■□□□□ 0.08
VRK3-217ENST00000599538 IQCF3P0C7M6 154 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 ACO1P21399 889 aaKnown RBP15.54■□□□□ 0.08
VRK3-217ENST00000599538 SSTR3P32745 418 aaPredicted RBP15.54■□□□□ 0.08
VRK3-217ENST00000599538 ADCYAP1R1P41586 468 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 GUCY2DQ02846 1103 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 ZNF211Q13398 564 aaPredicted RBP15.54■□□□□ 0.08
VRK3-217ENST00000599538 C2CD6Q53TS8 623 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 ZPBP2Q6X784 338 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 CEP120Q8N960 986 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 KRT35Q92764 455 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 PPP1R16BQ96T49 567 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■■■□□ 15.1
VRK3-217ENST00000599538 EPB41L5Q9HCM4 733 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 HPCAL4Q9UM19 191 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 DIS3Q9Y2L1 958 aaKnown RBP15.54■□□□□ 0.08
VRK3-217ENST00000599538 NUB1Q9Y5A7 615 aa15.54■□□□□ 0.08
VRK3-217ENST00000599538 PGRMC1O00264 195 aaKnown RBP15.53■□□□□ 0.08
VRK3-217ENST00000599538 TOM1L1O75674 476 aa15.53■□□□□ 0.08
VRK3-217ENST00000599538 EFNA5P52803 228 aa15.53■□□□□ 0.08
VRK3-217ENST00000599538 HADHBP55084 474 aaKnown RBP15.53■□□□□ 0.08
VRK3-217ENST00000599538 MXD4Q14582 209 aaPredicted RBP15.53■□□□□ 0.08
VRK3-217ENST00000599538 MESDQ14696 234 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms