RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 ALKAL1Q6UXT8 129 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 SV2BQ7L1I2 683 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 BICD1Q96G01 975 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 SNX27Q96L92 541 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 UROC1Q96N76 676 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 ACAP3Q96P50 834 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 KLHL5Q96PQ7 755 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 FIZ1Q96SL8 496 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 S1PR5Q9H228 398 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 CXCL16Q9H2A7 254 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 ST6GALNAC4Q9H4F1 302 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 RXFP1Q9HBX9 757 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 SLC38A7Q9NVC3 462 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 ANKFY1Q9P2R3 1169 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 TBX20Q9UMR3 447 aa18.24■□□□□ 0.51
USHBP1-208ENST00000598309 TMEM189-UBE2V1I3L0A0 370 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 CLDN3O15551 220 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 TADA2AO75478 443 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 KIF4AO95239 1232 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 ADH1AP07327 375 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 KCNE1P15382 129 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 STAT6P42226 847 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 ITIH3Q06033 890 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 ELAVL2Q12926 359 aaKnown RBP18.23■□□□□ 0.51
USHBP1-208ENST00000598309 GLRA4Q5JXX5 417 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 KIAA1841Q6NSI8 718 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 TAS1R1Q7RTX1 841 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 ZBTB45Q96K62 511 aaPredicted RBP18.23■□□□□ 0.51
USHBP1-208ENST00000598309 PAAF1Q9BRP4 392 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 GPR62Q9BZJ7 368 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 ZHX3Q9H4I2 956 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.23■□□□□ 0.51
USHBP1-208ENST00000598309 CNTN3Q9P232 1028 aa18.23■□□□□ 0.51
USHBP1-208ENST00000598309 TFIP11Q9UBB9 837 aaKnown RBP18.23■□□□□ 0.51
USHBP1-208ENST00000598309 SMIM28A0A1B0GU29 152 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 HNRNPDLO14979 420 aaKnown RBP18.22■□□□□ 0.51
USHBP1-208ENST00000598309 C1RP00736 705 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 HARSP12081 509 aaKnown RBP18.22■□□□□ 0.51
USHBP1-208ENST00000598309 EPCAMP16422 314 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 GAP43P17677 238 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 KLRC2P26717 231 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 LIG4P49917 911 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 CLCN4P51793 760 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 OSTNP61366 133 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 GTF2BQ00403 316 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 CREMQ03060 361 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 PKP1Q13835 747 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 KYAT1Q16773 422 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 FOXD4L5Q5VV16 416 aaPredicted RBP18.22■□□□□ 0.51
USHBP1-208ENST00000598309 MAP4K3Q8IVH8 894 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 KCNG4Q8TDN1 519 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 FOXD4L4Q8WXT5 416 aaPredicted RBP18.22■□□□□ 0.51
USHBP1-208ENST00000598309 DDX12PQ92771 950 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 ADAM7Q9H2U9 754 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 CACNG4Q9UBN1 327 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 SEL1LQ9UBV2 794 aa18.22■□□□□ 0.51
USHBP1-208ENST00000598309 A0A087X0B3 334 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 MYMKA6NI61 221 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 C2CD2LO14523 706 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 TEX28O15482 410 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 CUTAO60888 179 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 CBX2Q14781 532 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-208ENST00000598309 CES5AQ6NT32 575 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 DYMQ7RTS9 669 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 RABGGTAQ92696 567 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 HVCN1Q96D96 273 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 DDX27Q96GQ7 796 aaKnown RBP18.21■□□□□ 0.51
USHBP1-208ENST00000598309 FBXL18Q96ME1 805 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 NECTIN4Q96NY8 510 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 PHF7Q9BWX1 381 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-208ENST00000598309 SFXN1Q9H9B4 322 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 FNIP2Q9P278 1114 aa18.21■□□□□ 0.51
USHBP1-208ENST00000598309 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-208ENST00000598309 CLTAP09496 248 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 NMT1P30419 496 aaKnown RBP18.2■□□□□ 0.5
USHBP1-208ENST00000598309 UPP1Q16831 310 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 ELMSAN1Q6PJG2 1045 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 DCLRE1AQ6PJP8 1040 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 SFR1Q86XK3 245 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 SPRYD3Q8NCJ5 442 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 RIN2Q8WYP3 895 aaPredicted RBP18.2■□□□□ 0.5
USHBP1-208ENST00000598309 DNAJC19Q96DA6 116 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 HAPLN2Q9GZV7 340 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 CUEDC2Q9H467 287 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 DPP7Q9UHL4 492 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 CFAP45Q9UL16 551 aa18.2■□□□□ 0.5
USHBP1-208ENST00000598309 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 LOC730098B7Z3J9 87 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 MEFVO15553 781 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-208ENST00000598309 PPP1R37O75864 691 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 GLUD1P00367 558 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 MTHFRP42898 656 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 MATR3P43243 847 aaKnown RBP eCLIP18.19■□□□□ 0.5
USHBP1-208ENST00000598309 CLCNKBP51801 687 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 E2F4Q16254 413 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 SLC10A6Q3KNW5 377 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 RTP2Q5QGT7 225 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 AXDND1Q5T1B0 1012 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-208ENST00000598309 FAM171A1Q5VUB5 890 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms