RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 DCLRE1AQ6PJP8 1040 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 ALKAL1Q6UXT8 129 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 TMEM161BQ8NDZ6 487 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 B3GALT6Q96L58 329 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 UROC1Q96N76 676 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 PPP1R10Q96QC0 940 aaKnown RBP25.24■■□□□ 1.63
SSBP4-205ENST00000598159 TTPALQ9BTX7 342 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 RHOBTB2Q9BYZ6 727 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 PLEKHA4Q9H4M7 779 aa25.24■■□□□ 1.63
SSBP4-205ENST00000598159 H0YCG3 227 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 KIF4AO95239 1232 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 BRD1O95696 1058 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 ARSHQ5FYA8 562 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 XKR4Q5GH76 650 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 FAM171A1Q5VUB5 890 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 MPZL3Q6UWV2 235 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 HFE2Q6ZVN8 426 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 PALB2Q86YC2 1186 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 ZDHHC14Q8IZN3 488 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 ACAP3Q96P50 834 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 ODF2LQ9ULJ1 636 aa25.23■■□□□ 1.63
SSBP4-205ENST00000598159 TECTAO75443 2155 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 SMIM28A0A1B0GU29 152 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 CCDC195A0A1B0GUA6 201 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 TMEM221A6NGB7 291 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 TMEM189-UBE2V1I3L0A0 370 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 M0R296 226 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 SIGLEC14Q08ET2 396 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 PDXDC1Q6P996 788 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 LILRA6Q6PI73 481 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 ZBTB33Q86T24 672 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 CEP57Q86XR8 500 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 CEP120Q8N960 986 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 TDRD5Q8NAT2 981 aaKnown RBP25.22■■□□□ 1.63
SSBP4-205ENST00000598159 HASPINQ8TF76 798 aa25.22■■□□□ 1.63
SSBP4-205ENST00000598159 ACSF2Q96CM8 615 aaPredicted RBP25.22■■□□□ 1.63
SSBP4-205ENST00000598159 NPHP3-ACAD11A0A0J9YXS1 232 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 TGM5O43548 720 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 TOM1L1O75674 476 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 MAPTP10636 758 aaKnown RBP25.21■■□□□ 1.63
SSBP4-205ENST00000598159 SYT1P21579 422 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 SCP2P22307 547 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 OSTNP61366 133 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 GLRA4Q5JXX5 417 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 RTP2Q5QGT7 225 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 ZPBP2Q6X784 338 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 PIK3R5Q8WYR1 880 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 KCNN1Q92952 543 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 FAM122AQ96E09 287 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 DDX27Q96GQ7 796 aaKnown RBP25.21■■□□□ 1.63
SSBP4-205ENST00000598159 CCSER1Q9C0I3 900 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 SLC38A7Q9NVC3 462 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 PLXNA3P51805 1871 aa25.21■■□□□ 1.63
SSBP4-205ENST00000598159 ABLIM1O14639 778 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 B3GAT3O94766 335 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 PAPLNO95428 1278 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 GRIN1Q05586 938 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 UPP1Q16831 310 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 PRSS55Q6UWB4 352 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-205ENST00000598159 CCDC149Q6ZUS6 474 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 OTOP3Q7RTS5 596 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 RASSF8Q8NHQ8 419 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 LNX1Q8TBB1 728 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-205ENST00000598159 PBXIP1Q96AQ6 731 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 ZBTB45Q96K62 511 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-205ENST00000598159 KCNH6Q9H252 994 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 BLOC1S4Q9NUP1 217 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 LIMD1Q9UGP4 676 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 CLIC4Q9Y696 253 aa25.2■■□□□ 1.62
SSBP4-205ENST00000598159 TRAPPC3O43617 180 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 SPATA31D3P0C874 917 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 RPL17P18621 184 aaKnown RBP25.19■■□□□ 1.62
SSBP4-205ENST00000598159 DDIT3P35638 169 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 PLA2G5P39877 138 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 CLCNKBP51801 687 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 NCKAP1LP55160 1127 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 CACNB1Q02641 598 aaPredicted RBP25.19■■□□□ 1.62
SSBP4-205ENST00000598159 DHX8Q14562 1220 aaKnown RBP25.19■■□□□ 1.62
SSBP4-205ENST00000598159 KARSQ15046 597 aaKnown RBP25.19■■□□□ 1.62
SSBP4-205ENST00000598159 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.19■■□□□ 1.62
SSBP4-205ENST00000598159 SPATA31D4Q6ZUB0 917 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 HAUS6Q7Z4H7 955 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 GPBP1Q86WP2 473 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 GLYCTKQ8IVS8 523 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 UBALD2Q8IYN6 164 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 KREMEN2Q8NCW0 462 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 FEZF2Q8TBJ5 459 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 RAD54LQ92698 747 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 CLSTN3Q9BQT9 956 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 ZDHHC7Q9NXF8 308 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 SORCS3Q9UPU3 1222 aa25.19■■□□□ 1.62
SSBP4-205ENST00000598159 CLDN3O15551 220 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 KCNE1P15382 129 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 PLCG1P19174 1290 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 MCM6Q14566 821 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 PTPAQ15257 358 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 PSMD5Q16401 504 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 REEP2Q9BRK0 252 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 CITO14578 2027 aa25.18■■□□□ 1.62
SSBP4-205ENST00000598159 C2orf16Q68DN1 1984 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms