RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 RGL1Q9NZL6 768 aa12.14□□□□□ -0.47
ZNF548-207ENST00000597400 NDRG2Q9UN36 371 aaKnown RBP12.14□□□□□ -0.47
ZNF548-207ENST00000597400 IGF2RP11717 2491 aa12.14□□□□□ -0.47
ZNF548-207ENST00000597400 NUP210Q8TEM1 1887 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-207ENST00000597400 SDK1Q7Z5N4 2213 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 NR1I2O75469 434 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 TADA2AO75478 443 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 ECI2O75521 394 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 POU2F2P09086 479 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 AXLP30530 894 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
ZNF548-207ENST00000597400 SPIRE1Q08AE8 756 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 SRSF5Q13243 272 aaKnown RBP12.13□□□□□ -0.47
ZNF548-207ENST00000597400 GAS6Q14393 721 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 GRM2Q14416 872 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 LAIR1Q6GTX8 287 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 MOXD1Q6UVY6 613 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 ZNF852Q6ZMS4 543 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 PRR23CQ6ZRP0 262 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 MCRS1Q96EZ8 462 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 MTRQ99707 1265 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 SEMA4GQ9NTN9 838 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
ZNF548-207ENST00000597400 PCDHA4Q9UN74 947 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 ZMYM2Q9UBW7 1377 aa12.13□□□□□ -0.47
ZNF548-207ENST00000597400 XYLBO75191 536 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 P4HBP07237 508 aaKnown RBP12.12□□□□□ -0.47
ZNF548-207ENST00000597400 IFNAR1P17181 557 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 NLRP5P59047 1200 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 SATB1Q01826 763 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 CYP4A11Q02928 519 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 TUSC3Q13454 348 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
ZNF548-207ENST00000597400 INF2Q27J81 1249 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 XKR9Q5GH70 373 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 PRR23BQ6ZRT6 265 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 C4orf19Q8IY42 314 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 TCP11Q8WWU5 503 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 HAS1Q92839 578 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 NELL2Q99435 816 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 FAM126AQ9BYI3 521 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-207ENST00000597400 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 TRIM6Q9C030 488 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-207ENST00000597400 SH3GLB2Q9NR46 395 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
ZNF548-207ENST00000597400 CITO14578 2027 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 DMXL2Q8TDJ6 3036 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 LOC400499M0QZD8 3231 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 ASAP2O43150 1006 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 EDN1P05305 212 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 RETP07949 1114 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 RHOP08100 348 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 HOXB3P14651 431 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-207ENST00000597400 KCNA4P22459 653 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 GLRA2P23416 452 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 PMLP29590 882 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 OR1D2P34982 312 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 CCR2P41597 374 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 CCT2P78371 535 aaKnown RBP12.11□□□□□ -0.47
ZNF548-207ENST00000597400 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
ZNF548-207ENST00000597400 RAB33AQ14088 237 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 PCBP1Q15365 356 aaKnown RBP eCLIP12.11□□□□□ -0.47
ZNF548-207ENST00000597400 PRSS36Q5K4E3 855 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 SLC27A1Q6PCB7 646 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 DNASE1L2Q92874 299 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 ELSPBP1Q96BH3 223 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 TCEAL4Q96EI5 215 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 RXFP3Q9NSD7 469 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 C2orf42Q9NWW7 574 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 MRPS23Q9Y3D9 190 aaKnown RBP12.11□□□□□ -0.47
ZNF548-207ENST00000597400 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 CDY1Q9Y6F8 540 aa12.11□□□□□ -0.47
ZNF548-207ENST00000597400 MYO16Q9Y6X6 1858 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 DSPP15924 2871 aaKnown RBP12.1□□□□□ -0.47
ZNF548-207ENST00000597400 KIAA1549LQ6ZVL6 1849 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 A0A1B0GUA9 196 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 NCAM2O15394 837 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 HRO43593 1189 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 LRP3O75074 770 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 ARL2P36404 184 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 FGD1P98174 961 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 KRT32Q14532 448 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 CSRP2Q16527 193 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 CD300LGQ6UXG3 332 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 VITQ6UXI7 678 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 CELF5Q8N6W0 485 aaKnown RBP12.1□□□□□ -0.47
ZNF548-207ENST00000597400 DAGLBQ8NCG7 672 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 C3orf58Q8NDZ4 430 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-207ENST00000597400 MTRRQ9UBK8 725 aa12.1□□□□□ -0.47
ZNF548-207ENST00000597400 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms