RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 DNAJC6O75061 913 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 ABCD1P33897 745 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 EPHB1P54762 984 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 WDR4P57081 412 aaKnown RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 POU5F1Q01860 360 aaKnown RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 PDE1CQ14123 709 aaPredicted RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 RGS9BPQ6ZS82 235 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 NME8Q8N427 588 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 ZNF653Q96CK0 615 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 CADM1Q9BY67 442 aaKnown RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 ZWILCHQ9H900 591 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 RMI1Q9H9A7 625 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 MYH7P12883 1935 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 SLIT2O94813 1529 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 TRPA1O75762 1119 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 TMEM253P0C7T8 217 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 KITP10721 976 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 ECM1Q16610 540 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 Q4G0T1 1027 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 SLC13A5Q86YT5 568 aaPredicted RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 TGFBRAP1Q8WUH2 860 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 SLC20A1Q8WUM9 679 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 SLC7A6OSQ96CW6 309 aaPredicted RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 TRIM55Q9BYV6 548 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 TXLNGYQ9BZA5 131 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 ARL8BQ9NVJ2 186 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 PPARGC1AQ9UBK2 798 aaKnown RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 DIS3Q9Y2L1 958 aaKnown RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 TBC1D10BQ4KMP7 808 aaPredicted RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 WDR60Q8WVS4 1066 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 RIOK1Q9BRS2 568 aaKnown RBP16.41■□□□□ 0.22
PDE4C-211ENST00000597360 NINJ2Q9NZG7 142 aa16.41■□□□□ 0.22
PDE4C-211ENST00000597360 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 BAG3O95817 575 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 RPA3P35244 121 aaPredicted RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 CCNG1P51959 295 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 LIN52Q52LA3 116 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 MYCT1Q8N699 235 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 RAB3IL1Q8TBN0 382 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 FAF1Q9UNN5 650 aaPredicted RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 STXBP5LQ9Y2K9 1186 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 NRAPQ86VF7 1730 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 DISP2A7MBM2 1401 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 PTGIRP43119 386 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 DSG1Q02413 1049 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 MECOMQ03112 1051 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 SNF8Q96H20 258 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 NSL1Q96IY1 281 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 PLEKHG4BQ96PX9 1271 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 IQCGQ9H095 443 aaKnown RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 ASCC2Q9H1I8 757 aaPredicted RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 MAD2L2Q9UI95 211 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 ZBTB1Q9Y2K1 713 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 USP20Q9Y2K6 914 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 SIPA1L3O60292 1781 aaPredicted RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 AFDNP55196 1824 aaKnown RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 FAM13AO94988 1023 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 MAGEA10P43363 369 aaPredicted RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 SPDYCQ5MJ68 293 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 LRRC47Q8N1G4 583 aaKnown RBP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 NRG4Q8WWG1 115 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 RBM15Q96T37 977 aaKnown RBP eCLIP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 BTBD10Q9BSF8 475 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 SPATA16Q9BXB7 569 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 TRAF3IP3Q9Y228 551 aa16.4■□□□□ 0.22
PDE4C-211ENST00000597360 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
PDE4C-211ENST00000597360 MIF4GDA9UHW6 222 aaKnown RBP16.39■□□□□ 0.21
PDE4C-211ENST00000597360 ZWINTO95229 277 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 PSMC4P43686 418 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 GALK1P51570 392 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 KCNA1Q09470 495 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 TMEM62Q0P6H9 643 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 MED21Q13503 144 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 CLUL1Q15846 466 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 KNOP1Q1ED39 458 aaKnown RBP16.39■□□□□ 0.21
PDE4C-211ENST00000597360 IZUMO3Q5VZ72 239 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 DGKHQ86XP1 1220 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 ANKLE1Q8NAG6 615 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 OLFM3Q96PB7 478 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 MARCOQ9UEW3 520 aaPredicted RBP16.39■□□□□ 0.21
PDE4C-211ENST00000597360 PRKAG3Q9UGI9 489 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 COG5Q9UP83 839 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 CETPP11597 493 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 GRM4Q14833 912 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 CCDC24Q8N4L8 307 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 SLC26A7Q8TE54 656 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 FAM192AQ9GZU8 254 aa16.39■□□□□ 0.21
PDE4C-211ENST00000597360 ACP6Q9NPH0 428 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms