RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 LILRB3O75022 631 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 SOD2P04179 222 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 LIG4P49917 911 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 YARSP54577 528 aaKnown RBP23.06■■□□□ 1.28
PNKP-209ENST00000596726 PUS10Q3MIT2 529 aaKnown RBP23.06■■□□□ 1.28
PNKP-209ENST00000596726 TAS1R1Q7RTX1 841 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 ADAMTS19Q8TE59 1207 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 STAMQ92783 540 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 HVCN1Q96D96 273 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 SNX27Q96L92 541 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 HERC2P3Q9BVR0 1158 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 OLFML3Q9NRN5 406 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 FAM13BQ9NYF5 915 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 ATP6V1DQ9Y5K8 247 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 CUL9Q8IWT3 2517 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 NCOR1O75376 2440 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 SMIM28A0A1B0GU29 152 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 HNRNPDLO14979 420 aaKnown RBP23.05■■□□□ 1.28
PNKP-209ENST00000596726 POLR2DO15514 142 aaKnown RBP23.05■■□□□ 1.28
PNKP-209ENST00000596726 HARSP12081 509 aaKnown RBP23.05■■□□□ 1.28
PNKP-209ENST00000596726 NDUFV1P49821 464 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 RBM10P98175 930 aaKnown RBP23.05■■□□□ 1.28
PNKP-209ENST00000596726 HSP90AA2PQ14568 343 aaPredicted RBP23.05■■□□□ 1.28
PNKP-209ENST00000596726 PTPN14Q15678 1187 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 GLRA4Q5JXX5 417 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 PTCRAQ6ISU1 281 aaPredicted RBP23.05■■□□□ 1.28
PNKP-209ENST00000596726 CNNM4Q6P4Q7 775 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 SLC39A4Q6P5W5 647 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 RABGGTAQ92696 567 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 LRRC27Q9C0I9 530 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 ADAM28Q9UKQ2 775 aa23.05■■□□□ 1.28
PNKP-209ENST00000596726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.04■■□□□ 1.28
PNKP-209ENST00000596726 CASTOR2A6NHX0 329 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 FAM189A1O60320 539 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 CLASP2O75122 1294 aaKnown RBP23.04■■□□□ 1.28
PNKP-209ENST00000596726 IDEP14735 1019 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 KCNE1P15382 129 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 SLC10A6Q3KNW5 377 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 SEZ6Q53EL9 994 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 HERC4Q5GLZ8 1057 aaPredicted RBP23.04■■□□□ 1.28
PNKP-209ENST00000596726 ADALQ6DHV7 355 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 SPATA32Q96LK8 384 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 ZMAT2Q96NC0 199 aaKnown RBP23.04■■□□□ 1.28
PNKP-209ENST00000596726 GPR62Q9BZJ7 368 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 TRIM9Q9C026 710 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 MRPL44Q9H9J2 332 aaKnown RBP23.04■■□□□ 1.28
PNKP-209ENST00000596726 MAGEF1Q9HAY2 307 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 CHST7Q9NS84 486 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 PANK4Q9NVE7 773 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 CNTN3Q9P232 1028 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 CD207Q9UJ71 328 aa23.04■■□□□ 1.28
PNKP-209ENST00000596726 BARX2Q9UMQ3 279 aaPredicted RBP23.04■■□□□ 1.28
PNKP-209ENST00000596726 A0A0B4J269 797 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 MATR3P43243 847 aaKnown RBP eCLIP23.03■■□□□ 1.28
PNKP-209ENST00000596726 AMPD3Q01432 767 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 COASYQ13057 564 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 KIAA0319Q5VV43 1072 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 FUT10Q6P4F1 479 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 C7orf25Q9BPX7 421 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 TBC1D7Q9P0N9 293 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 STYXL1Q9Y6J8 313 aa23.03■■□□□ 1.28
PNKP-209ENST00000596726 ANKRD63C9JTQ0 380 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 OGTO15294 1046 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 MBTPS2O43462 519 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 KIF4AO95239 1232 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 CLTAP09496 248 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 IL9P15248 144 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 CMA1P23946 247 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 CA8P35219 290 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 DSG1Q02413 1049 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 CCDC65Q8IXS2 484 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 GPR65Q8IYL9 337 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 UHRF1Q96T88 793 aaPredicted RBP23.02■■□□□ 1.28
PNKP-209ENST00000596726 SCAND2PQ9GZW5 306 aaPredicted RBP23.02■■□□□ 1.28
PNKP-209ENST00000596726 MRPL17Q9NRX2 175 aaKnown RBP23.02■■□□□ 1.28
PNKP-209ENST00000596726 KCNH3Q9ULD8 1083 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 SSX2IPQ9Y2D8 614 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 HCFC2Q9Y5Z7 792 aa23.02■■□□□ 1.28
PNKP-209ENST00000596726 C5orf42Q9H799 3197 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 TMEM189-UBE2V1I3L0A0 370 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 TADA2AO75478 443 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 URODP06132 367 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 TNFSF9P41273 254 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 GLUD2P49448 558 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 CASP5P51878 434 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 SOX4Q06945 474 aaPredicted RBP23.01■■□□□ 1.27
PNKP-209ENST00000596726 KCNA1Q09470 495 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 SMAD4Q13485 552 aaKnown RBP23.01■■□□□ 1.27
PNKP-209ENST00000596726 CLUL1Q15846 466 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 KYAT1Q16773 422 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 UPP1Q16831 310 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 L1TD1Q5T7N2 865 aaKnown RBP23.01■■□□□ 1.27
PNKP-209ENST00000596726 SMRP1Q8NCR6 262 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 SLC22A17Q8WUG5 538 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 UROC1Q96N76 676 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 NECAB3Q96P71 396 aaPredicted RBP23.01■■□□□ 1.27
PNKP-209ENST00000596726 KLHL5Q96PQ7 755 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 PYM1Q9BRP8 204 aaKnown RBP23.01■■□□□ 1.27
PNKP-209ENST00000596726 FGFBP2Q9BYJ0 223 aa23.01■■□□□ 1.27
PNKP-209ENST00000596726 PLEKHA5Q9HAU0 1116 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms