RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 C8AP07357 584 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 DCNP07585 359 aaKnown RBP11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 HNRNPA1P09651 372 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 NTHL1P78549 312 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 HTR4Q13639 388 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 CDCA2Q69YH5 1023 aaPredicted RBP11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 PDXDC1Q6P996 788 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 DCLRE1AQ6PJP8 1040 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 BSNDQ8WZ55 320 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 CXCL16Q9H2A7 254 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 POLD4Q9HCU8 107 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 ARHGEF3Q9NR81 526 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 SIT1Q9Y3P8 196 aa11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 ZFP37Q9Y6Q3 630 aaPredicted RBP11.65□□□□□ -0.54
CHMP2A-202ENST00000596708 RALGAPA1Q6GYQ0 2036 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 ANHXE9PGG2 379 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 XYLBO75191 536 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 NEFLP07196 543 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 OR52Z1P0C646 297 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 CYP11B2P19099 503 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 RPA1P27694 616 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 NAMPTP43490 491 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 ID4P47928 161 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 GPC5P78333 572 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 FOXK2Q01167 660 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 PPP2R5AQ15172 486 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 EEF1DP3Q658K8 133 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 PHLDB3Q6NSJ2 640 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 PARM1Q6UWI2 310 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 FGF14Q92915 247 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 IFT74Q96LB3 600 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 RPP25Q9BUL9 199 aaKnown RBP11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 SLC2A4RGQ9NR83 387 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 CDH7Q9ULB5 785 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 R4GN57 208 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 PATJQ8NI35 1801 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 DMDP11532 3685 aa11.64□□□□□ -0.55
CHMP2A-202ENST00000596708 ADAM12O43184 909 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 B3GAT3O94766 335 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 LMNAP02545 664 aaKnown RBP11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 OR1D2P34982 312 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 CCT6AP40227 531 aaKnown RBP11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 NAB2Q15742 525 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 DCAF4L1Q3SXM0 396 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 GLRA4Q5JXX5 417 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 MTSS1LQ765P7 747 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 SLC7A14Q8TBB6 771 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 FGF13Q92913 245 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 SHDQ96IW2 340 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 C8orf76Q96K31 380 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 KIFC3Q9BVG8 833 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 FOXQ1Q9C009 403 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 SEMA4AQ9H3S1 761 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 ANK1P16157 1881 aa11.63□□□□□ -0.55
CHMP2A-202ENST00000596708 EP300Q09472 2414 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 CFAP54Q96N23 3096 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 K7ERI5 159 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 EDN1P05305 212 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 FGFR3P22607 806 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 HOXA9P31269 272 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 CLCNKBP51801 687 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 STARD6P59095 220 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 SNW1Q13573 536 aaKnown RBP11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 RAB33AQ14088 237 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 UVSSAQ2YD98 709 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 TTC38Q5R3I4 469 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 ATF7IP2Q5U623 682 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 HAUS3Q68CZ6 603 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 APBB1IPQ7Z5R6 666 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 C1orf210Q8IVY1 113 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 CCDC83Q8IWF9 413 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 ITFG1Q8TB96 612 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 HINFPQ9BQA5 517 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 CCDC113Q9H0I3 377 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 BHMT2Q9H2M3 363 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 HCFC1R1Q9NWW0 138 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 CDY1Q9Y6F8 540 aa11.62□□□□□ -0.55
CHMP2A-202ENST00000596708 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 CCDC169A6NNP5 214 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 TRAPPC3O43617 180 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 EIF5BO60841 1220 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 LRRN2O75325 713 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 SP9P0CG40 484 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 MUTP22033 750 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 IGFBP6P24592 240 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 TKTP29401 623 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 BRCC3P46736 316 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 RBM25P49756 843 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 EFNA5P52803 228 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 YARSP54577 528 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 ST3GAL1Q11201 340 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 ORC2Q13416 577 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 ECM1Q16610 540 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 PABPC1LQ4VXU2 614 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 SLC44A4Q53GD3 710 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms