RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 JPH2Q9BR39 696 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 TTPALQ9BTX7 342 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 CSRNP2Q9H175 543 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 BRD9Q9H8M2 597 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 WRAP73Q9P2S5 460 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 KCNH3Q9ULD8 1083 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 ZMIZ1Q9ULJ6 1067 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 GIT1Q9Y2X7 761 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 ITPR1Q14643 2758 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 EML1O00423 815 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 MAN2B1O00754 1011 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 SF3B1O75533 1304 aaKnown RBP eCLIP15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 TDP2O95551 362 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 CEBPBP17676 345 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 IGFBP6P24592 240 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 OR1D2P34982 312 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 PSMC5P62195 406 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 HSP90AA2PQ14568 343 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 PPP2R5DQ14738 602 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 AASDHQ4L235 1098 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 FAM160A2Q8N612 972 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 PIK3R5Q8WYR1 880 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 FAM3CQ92520 227 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 CEP170P1Q96L14 293 aa15.3■□□□□ 0.04
SHKBP1-208ENST00000595726 RALGAPA1Q6GYQ0 2036 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 GCN1Q92616 2671 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 CASTOR2A6NHX0 329 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 AXIN1O15169 862 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 KIF4AO95239 1232 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 RHOP08100 348 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 FCARP24071 287 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 GNA11P29992 359 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 USP11P51784 963 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 NOTUMQ6P988 496 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 FERMT3Q86UX7 667 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 ELSPBP1Q96BH3 223 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 CXCL16Q9H2A7 254 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 DHX33Q9H6R0 707 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 RBM12Q9NTZ6 932 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 C2orf42Q9NWW7 574 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 PARP2Q9UGN5 583 aa15.29■□□□□ 0.04
SHKBP1-208ENST00000595726 TDRD15B5MCY1 1934 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 INO80B-WBP1J3KQ70 363 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 ZBTB39O15060 712 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 B4GALT5O43286 388 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 CHRNB1P11230 501 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 RAB33AQ14088 237 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 AMHR2Q16671 573 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 FAM78AQ5JUQ0 283 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 TBCKQ8TEA7 893 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 DNASE1L2Q92874 299 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 TCEAL4Q96EI5 215 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 TRMT61BQ9BVS5 477 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 TRIM6Q9C030 488 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 ARRDC1-AS1Q9H2J1 176 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 GDE1Q9NZC3 331 aa15.28■□□□□ 0.04
SHKBP1-208ENST00000595726 K7ESF4 209 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 NPTXRO95502 500 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 ARF4P18085 180 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 SPINK2P20155 84 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 RPS6KB1P23443 525 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 CCNE1P24864 410 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 AXLP30530 894 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 GDI1P31150 447 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 QARSP47897 775 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 RCAN1P53805 252 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 PTENP60484 403 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 GRIK3Q13003 919 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 Q4G0T1 1027 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 STPG1Q5TH74 334 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 UNQ6494/PRO21346Q6UXR6 183 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 Q6ZUG5 572 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 CEP68Q76N32 757 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 CCDC12Q8WUD4 166 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 AGXT2Q9BYV1 514 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 SMOC1Q9H4F8 434 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 ZNF334Q9HCZ1 680 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 VPS54Q9P1Q0 977 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 PIAS3Q9Y6X2 628 aa15.27■□□□□ 0.04
SHKBP1-208ENST00000595726 NID2Q14112 1375 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 KCNK5O95279 499 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 POU2F2P09086 479 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 PSMA5P28066 241 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 RFC5P40937 340 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 LIMK1P53667 647 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 FGD1P98174 961 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 NCBP1Q09161 790 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 TUSC3Q13454 348 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 EMC2Q15006 297 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 Q6ZS52 159 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 LONP2Q86WA8 852 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 FBXL16Q8N461 479 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 C12orf50Q8NA57 414 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 ETNPPLQ8TBG4 499 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 BICD2Q8TD16 824 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 BRF1Q92994 677 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 CCDC51Q96ER9 411 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms