RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 CLUL1Q15846 466 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 TAS1R1Q7RTX1 841 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 ZNF720Q7Z2F6 126 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 MAP4K3Q8IVH8 894 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 ADAMTS19Q8TE59 1207 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 DHX58Q96C10 678 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 SNX27Q96L92 541 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 ZMAT2Q96NC0 199 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 TCHPQ9BT92 498 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 CCDC94Q9BW85 323 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 BARX2Q9UMQ3 279 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 SMIM28A0A1B0GU29 152 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 CASTOR2A6NHX0 329 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 HNRNPDLO14979 420 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 CLASP2O75122 1294 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 KIF4AO95239 1232 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 CXCL14O95715 111 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 SOD2P04179 222 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 IL9P15248 144 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 SCP2P22307 547 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 IGFBP6P24592 240 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 CASP5P51878 434 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 KCNA1Q09470 495 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 SLC10A6Q3KNW5 377 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 ZBTB41Q5SVQ8 909 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 APBB1IPQ7Z5R6 666 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 BICD1Q96G01 975 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 CDCA3Q99618 268 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 HERC2P3Q9BVR0 1158 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 GPR62Q9BZJ7 368 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 TRIM9Q9C026 710 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 TNMDQ9H2S6 317 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 GOLGA2P5Q9HBQ8 144 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 OLFML3Q9NRN5 406 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 TBC1D7Q9P0N9 293 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 ADAM28Q9UKQ2 775 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 TSC2P49815 1807 aa12.02□□□□□ -0.49
SHKBP1-206ENST00000595523 A0A0B4J269 797 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 CLDN3O15551 220 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 CXCL8P10145 99 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 IDEP14735 1019 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 KCNE1P15382 129 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 GAP43P17677 238 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 TNFSF9P41273 254 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 NDUFV1P49821 464 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 LIG4P49917 911 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 KRT85P78386 507 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 HSP90AA2PQ14568 343 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 LLGL2Q6P1M3 1020 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 FUT10Q6P4F1 479 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 CNNM4Q6P4Q7 775 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 CD300LGQ6UXG3 332 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 TMEM184AQ6ZMB5 413 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 TMEM130Q8N3G9 435 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 IQUBQ8NA54 791 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 SMRP1Q8NCR6 262 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 GLIS3Q8NEA6 775 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 HASPINQ8TF76 798 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 B3GALT6Q96L58 329 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 SPATA32Q96LK8 384 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 ACAP3Q96P50 834 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 COLEC11Q9BWP8 271 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 CUEDC2Q9H467 287 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 TOPORSQ9NS56 1045 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 CHST7Q9NS84 486 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 CNTN3Q9P232 1028 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 SEL1LQ9UBV2 794 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 HCFC2Q9Y5Z7 792 aa12.01□□□□□ -0.49
SHKBP1-206ENST00000595523 MYO10Q9HD67 2058 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 MBTPS2O43462 519 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 NR1I2O75469 434 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 CNPP09543 421 aaKnown RBP12□□□□□ -0.49
SHKBP1-206ENST00000595523 MYBP10242 640 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 CASP1P29466 404 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 CA8P35219 290 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 CLCNKBP51801 687 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 YARSP54577 528 aaKnown RBP12□□□□□ -0.49
SHKBP1-206ENST00000595523 DSG1Q02413 1049 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 COASYQ13057 564 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 ENOX2Q16206 610 aaKnown RBP12□□□□□ -0.49
SHKBP1-206ENST00000595523 UPP1Q16831 310 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 HERC4Q5GLZ8 1057 aaPredicted RBP12□□□□□ -0.49
SHKBP1-206ENST00000595523 KIAA0319Q5VV43 1072 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 C3orf58Q8NDZ4 430 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 SLC22A17Q8WUG5 538 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 HPS3Q969F9 1004 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 C18orf25Q96B23 403 aaPredicted RBP12□□□□□ -0.49
SHKBP1-206ENST00000595523 UHRF1Q96T88 793 aaPredicted RBP12□□□□□ -0.49
SHKBP1-206ENST00000595523 MRPL44Q9H9J2 332 aaKnown RBP12□□□□□ -0.49
SHKBP1-206ENST00000595523 STK39Q9UEW8 545 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 CD207Q9UJ71 328 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 KCNH3Q9ULD8 1083 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms