RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 UCHL3P15374 230 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 EIF4BP23588 611 aaKnown RBP14.31□□□□□ -0.12
VRK3-205ENST00000593919 SNX17Q15036 470 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 ARHGAP29Q52LW3 1261 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 KLHDC7AQ5VTJ3 777 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 LMBRD2Q68DH5 695 aaPredicted RBP14.31□□□□□ -0.12
VRK3-205ENST00000593919 SERINC5Q86VE9 423 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 BRSK2Q8IWQ3 736 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 THNSL1Q8IYQ7 743 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 WNT8BQ93098 351 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 EDEM3Q9BZQ6 932 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 UNC93B1Q9H1C4 597 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 TMEM8AQ9HCN3 771 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 MKI67P46013 3256 aaKnown RBP14.3□□□□□ -0.12
VRK3-205ENST00000593919 LRRC53A6NM62 1247 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 RBAK-RBAKDNI3L0D1 243 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 PMM2O15305 246 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 CLDN10P78369 228 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 ITGA7Q13683 1181 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 SLC9C1Q4G0N8 1177 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 EPC2Q52LR7 807 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 ZNF569Q5MCW4 686 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 KRT39Q6A163 491 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 WDR59Q6PJI9 974 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 RRAGAQ7L523 313 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 CATSPER4Q7RTX7 472 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 DNAJC5GQ8N7S2 189 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 LMO3Q8TAP4 145 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 FAM84AQ96KN4 292 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 GLT1D1Q96MS3 346 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 INTS2Q9H0H0 1204 aaKnown RBP14.3□□□□□ -0.12
VRK3-205ENST00000593919 CPSF3Q9UKF6 684 aaKnown RBP14.3□□□□□ -0.12
VRK3-205ENST00000593919 FHOD1Q9Y613 1164 aa14.3□□□□□ -0.12
VRK3-205ENST00000593919 PTPRJQ12913 1337 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 A0A1B0GUA9 196 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 LRRN2O75325 713 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 ABL1P00519 1130 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 MYCP01106 439 aaPredicted RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 GTF2H1P32780 548 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 OSTNP61366 133 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 CETN1Q12798 172 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 MEA1Q16626 185 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 SV2AQ7L0J3 742 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 ZNF516Q92618 1163 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 TSEN34Q9BSV6 310 aaKnown RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 PLAGL2Q9UPG8 496 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 MRFAP1Q9Y605 127 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 A0A1W2PQ45 241 aaPredicted RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 A0A1W2PQY0 241 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 NDUFA10O95299 355 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 MCF2P10911 925 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 TNNI1P19237 187 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 HOXA11P31270 313 aaPredicted RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 CRYBB1P53674 252 aaPredicted RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 MRPS6P82932 125 aaKnown RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 PCBP1Q15365 356 aaKnown RBP eCLIP14.29□□□□□ -0.12
VRK3-205ENST00000593919 MTFR1Q15390 333 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 PTGISQ16647 500 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 PDXDC1Q6P996 788 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 GJB7Q6PEY0 223 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 FBXO38Q6PIJ6 1188 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 TMEM192Q8IY95 271 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 CELF4Q9BZC1 486 aaKnown RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 PAK6Q9NQU5 681 aaPredicted RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 FBXL5Q9UKA1 691 aa14.29□□□□□ -0.12
VRK3-205ENST00000593919 AJAP1Q9UKB5 411 aaPredicted RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 EPN1Q9Y6I3 576 aaPredicted RBP14.29□□□□□ -0.12
VRK3-205ENST00000593919 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 TADA3O75528 432 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 HNRNPH3P31942 346 aaKnown RBP14.28□□□□□ -0.12
VRK3-205ENST00000593919 ENOX2Q16206 610 aaKnown RBP14.28□□□□□ -0.12
VRK3-205ENST00000593919 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 SLC35F6Q8N357 371 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 ARRDC4Q8NCT1 418 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 EHBP1Q8NDI1 1231 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 CGRRF1Q99675 332 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 ADPGKQ9BRR6 497 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
VRK3-205ENST00000593919 APEX2Q9UBZ4 518 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 COQ4Q9Y3A0 265 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
VRK3-205ENST00000593919 M0QZ92 97 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 CTSHP09668 335 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 CXCL8P10145 99 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 ARHGAP25P42331 645 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 C15orf39Q6ZRI6 1047 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 FBXL13Q8NEE6 735 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 TAS1R2Q8TE23 839 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 UBXN4Q92575 508 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 SEMA4DQ92854 862 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 FAM212AQ96EL1 285 aa14.27□□□□□ -0.12
VRK3-205ENST00000593919 ZNHIT6Q9NWK9 470 aaKnown RBP14.27□□□□□ -0.12
VRK3-205ENST00000593919 REXO2Q9Y3B8 237 aaKnown RBP14.27□□□□□ -0.12
VRK3-205ENST00000593919 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 KBTBD13C9JR72 458 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 STAG3L1P0CL83 205 aa14.27□□□□□ -0.13
VRK3-205ENST00000593919 RAPGEF1Q13905 1077 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms