RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 F8W810 466 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 RRP8O43159 456 aaKnown RBP13.3□□□□□ -0.28
ZNF558-202ENST00000593891 APBB3O95704 486 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 GP1BBP13224 206 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 DPP6P42658 865 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 NT5C2P49902 561 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 RIPPLY3P57055 190 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 HAND2P61296 217 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 SWSAP1Q6NVH7 229 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 MIS18BP1Q6P0N0 1132 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 PCSK4Q6UW60 755 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 ABHD15Q6UXT9 468 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 TMPRSS7Q7RTY8 843 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 CCDC60Q8IWA6 550 aaPredicted RBP13.3□□□□□ -0.28
ZNF558-202ENST00000593891 LINC01465Q8N7H1 131 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 WBP1Q96G27 269 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
ZNF558-202ENST00000593891 IL17BQ9UHF5 180 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 ADAM28Q9UKQ2 775 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 HEPACAM2A8MVW5 462 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
ZNF558-202ENST00000593891 MEIS2O14770 477 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 TADA2AO75478 443 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 CD59P13987 128 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 ATP4AP20648 1035 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 KIF5BP33176 963 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 DGKEP52429 567 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 GFPT1Q06210 699 aaPredicted RBP13.29□□□□□ -0.28
ZNF558-202ENST00000593891 DSC1Q08554 894 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 PSMD5Q16401 504 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 RTP2Q5QGT7 225 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 SLC23A3Q6PIS1 610 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 SYT12Q8IV01 421 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 ZNF513Q8N8E2 541 aaPredicted RBP13.29□□□□□ -0.28
ZNF558-202ENST00000593891 TTC8Q8TAM2 541 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 TMEM209Q96SK2 561 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 RIOX1Q9H6W3 641 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 TRPV4Q9HBA0 871 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 KIAA1522Q9P206 1035 aaPredicted RBP13.29□□□□□ -0.28
ZNF558-202ENST00000593891 MAD2L2Q9UI95 211 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 MYH6P13533 1939 aa13.29□□□□□ -0.28
ZNF558-202ENST00000593891 CREBBPQ92793 2442 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 SH3BP5O60239 455 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 CFIP05156 583 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 C6P13671 934 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 ZNF76P36508 570 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 GRSF1Q12849 480 aaKnown RBP eCLIP13.28□□□□□ -0.28
ZNF558-202ENST00000593891 PRSS36Q5K4E3 855 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
ZNF558-202ENST00000593891 CATSPER4Q7RTX7 472 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 HAUS6Q7Z4H7 955 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 CEP57Q86XR8 500 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 PDCD7Q8N8D1 485 aaKnown RBP13.28□□□□□ -0.28
ZNF558-202ENST00000593891 ENAHQ8N8S7 591 aaPredicted RBP13.28□□□□□ -0.28
ZNF558-202ENST00000593891 CAMK1GQ96NX5 476 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 ANKMY1Q9P2S6 941 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 DNMT3LQ9UJW3 386 aa13.28□□□□□ -0.28
ZNF558-202ENST00000593891 COL6A6A6NMZ7 2263 aa13.27□□□□□ -0.28
ZNF558-202ENST00000593891 TNFRSF10BO14763 440 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 LRG1P02750 347 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 EIF2S3P41091 472 aaKnown RBP13.27□□□□□ -0.29
ZNF558-202ENST00000593891 IL12RB1P42701 662 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 SLC14A1Q13336 389 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 RAB33AQ14088 237 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 GRM4Q14833 912 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 PTPAQ15257 358 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 CYP4A22Q5TCH4 519 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 LNX1Q8TBB1 728 aaPredicted RBP13.27□□□□□ -0.29
ZNF558-202ENST00000593891 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
ZNF558-202ENST00000593891 TCEAL4Q96EI5 215 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 LY9Q9HBG7 655 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 POLR3BQ9NW08 1133 aaPredicted RBP13.27□□□□□ -0.29
ZNF558-202ENST00000593891 GTSE1Q9NYZ3 720 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 SLC6A14Q9UN76 642 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 SF3B1O75533 1304 aaKnown RBP eCLIP13.27□□□□□ -0.29
ZNF558-202ENST00000593891 COL4A2P08572 1712 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 WDR81Q562E7 1941 aa13.27□□□□□ -0.29
ZNF558-202ENST00000593891 SPDYE3A6NKU9 549 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 DDX39AO00148 427 aaKnown RBP13.26□□□□□ -0.29
ZNF558-202ENST00000593891 CCNE2O96020 404 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 ITGA4P13612 1032 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 SPIRE1Q08AE8 756 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 ITGB3BPQ13352 177 aaPredicted RBP13.26□□□□□ -0.29
ZNF558-202ENST00000593891 C4orf17Q53FE4 359 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 TSHZ3Q63HK5 1081 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 LPCAT2Q7L5N7 544 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 SLCO6A1Q86UG4 719 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 TBC1D10CQ8IV04 446 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 GALNT15Q8N3T1 639 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 CNNM3Q8NE01 707 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 CEP76Q8TAP6 659 aa13.26□□□□□ -0.29
ZNF558-202ENST00000593891 A0A087WZ62 844 aa13.25□□□□□ -0.29
ZNF558-202ENST00000593891 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
ZNF558-202ENST00000593891 ADAM12O43184 909 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms