RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 RTP2Q5QGT7 225 aa25.57■■□□□ 1.68
MBD3-211ENST00000592965 SUGP1Q8IWZ8 645 aaKnown RBP25.57■■□□□ 1.68
MBD3-211ENST00000592965 ACSF2Q96CM8 615 aaPredicted RBP25.57■■□□□ 1.68
MBD3-211ENST00000592965 PPP1R10Q96QC0 940 aaKnown RBP25.57■■□□□ 1.68
MBD3-211ENST00000592965 CDT1Q9H211 546 aa25.57■■□□□ 1.68
MBD3-211ENST00000592965 SLC26A4O43511 780 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 TGM5O43548 720 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 GRM5P41594 1212 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 TMEM119Q4V9L6 283 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 LARP1BQ659C4 914 aaKnown RBP25.56■■□□□ 1.68
MBD3-211ENST00000592965 LILRA6Q6PI73 481 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 SYT2Q8N9I0 419 aaPredicted RBP25.56■■□□□ 1.68
MBD3-211ENST00000592965 HASPINQ8TF76 798 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 SPIRE2Q8WWL2 714 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 PIK3R5Q8WYR1 880 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 AK8Q96MA6 479 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 NTPCRQ9BSD7 190 aaKnown RBP25.56■■□□□ 1.68
MBD3-211ENST00000592965 TTPALQ9BTX7 342 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 KCND2Q9NZV8 630 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 LIMD1Q9UGP4 676 aa25.56■■□□□ 1.68
MBD3-211ENST00000592965 CCDC195A0A1B0GUA6 201 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 TMEM189-UBE2V1I3L0A0 370 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 BRD1O95696 1058 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 PROZP22891 400 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 ZNF568Q3ZCX4 644 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 FAM171A1Q5VUB5 890 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 PALB2Q86YC2 1186 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 CDK5RAP3Q96JB5 506 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 TARS2Q9BW92 718 aaKnown RBP25.55■■□□□ 1.68
MBD3-211ENST00000592965 TOPORSQ9NS56 1045 aaPredicted RBP25.55■■□□□ 1.68
MBD3-211ENST00000592965 KCNG1Q9UIX4 513 aa25.55■■□□□ 1.68
MBD3-211ENST00000592965 PDCD11Q14690 1871 aaKnown RBP25.54■■□□□ 1.68
MBD3-211ENST00000592965 RFPL2O75678 378 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 ASGR2P07307 311 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 RPL17P18621 184 aaKnown RBP25.54■■□□□ 1.68
MBD3-211ENST00000592965 SLC12A3P55017 1021 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 XKR4Q5GH76 650 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 GLRA4Q5JXX5 417 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 PRSS55Q6UWB4 352 aaPredicted RBP25.54■■□□□ 1.68
MBD3-211ENST00000592965 BRAPQ7Z569 592 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 CEP120Q8N960 986 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 ZNF707Q96C28 371 aaPredicted RBP25.54■■□□□ 1.68
MBD3-211ENST00000592965 UROC1Q96N76 676 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 CCDC94Q9BW85 323 aaPredicted RBP25.54■■□□□ 1.68
MBD3-211ENST00000592965 WDR6Q9NNW5 1121 aaKnown RBP25.54■■□□□ 1.68
MBD3-211ENST00000592965 ZDHHC7Q9NXF8 308 aa25.54■■□□□ 1.68
MBD3-211ENST00000592965 ABLIM1O14639 778 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 SLC16A4O15374 487 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 BMP15O95972 392 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 PLA2G4BP0C869 781 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 SPATA31D3P0C874 917 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 MCF2P10911 925 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 PLS3P13797 630 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 YARSP54577 528 aaKnown RBP25.53■■□□□ 1.68
MBD3-211ENST00000592965 PSMD5Q16401 504 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 PDXDC1Q6P996 788 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.53■■□□□ 1.68
MBD3-211ENST00000592965 SPATA31D4Q6ZUB0 917 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 LNX1Q8TBB1 728 aaPredicted RBP25.53■■□□□ 1.68
MBD3-211ENST00000592965 SMG7Q92540 1137 aaKnown RBP25.53■■□□□ 1.68
MBD3-211ENST00000592965 CLUHO75153 1309 aa25.53■■□□□ 1.68
MBD3-211ENST00000592965 SFI1A8K8P3 1242 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 CUL4AQ13619 759 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 MPZL3Q6UWV2 235 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 ALKAL1Q6UXT8 129 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 GLYCTKQ8IVS8 523 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 TMEM161BQ8NDZ6 487 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 STAMQ92783 540 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 PLIN2Q99541 437 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 CLSTN3Q9BQT9 956 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 DOCK6Q96HP0 2047 aa25.52■■□□□ 1.68
MBD3-211ENST00000592965 SMIM28A0A1B0GU29 152 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 MYBP10242 640 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 SMTNP53814 917 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 NHLH1Q02575 133 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 RAD51AP2Q09MP3 1159 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 UPP1Q16831 310 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 DCLRE1AQ6PJP8 1040 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 CEP57Q86XR8 500 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 SNX27Q96L92 541 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 PRRX2Q99811 253 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 SMOC2Q9H3U7 446 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 SLC38A7Q9NVC3 462 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 FBXW11Q9UKB1 542 aa25.51■■□□□ 1.67
MBD3-211ENST00000592965 N4BP1O75113 896 aaKnown RBP25.5■■□□□ 1.67
MBD3-211ENST00000592965 ZMYND10O75800 440 aa25.5■■□□□ 1.67
MBD3-211ENST00000592965 B3GAT3O94766 335 aa25.5■■□□□ 1.67
MBD3-211ENST00000592965 MAPTP10636 758 aaKnown RBP25.5■■□□□ 1.67
MBD3-211ENST00000592965 FGFR3P22607 806 aa25.5■■□□□ 1.67
MBD3-211ENST00000592965 CLCNKBP51801 687 aa25.5■■□□□ 1.67
MBD3-211ENST00000592965 STRN3Q13033 797 aa25.5■■□□□ 1.67
MBD3-211ENST00000592965 TCHPQ9BT92 498 aa25.5■■□□□ 1.67
MBD3-211ENST00000592965 PRKD2Q9BZL6 878 aa25.5■■□□□ 1.67
MBD3-211ENST00000592965 TOM1L1O75674 476 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 KCNE1P15382 129 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 UBA7P41226 1012 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 VCPP55072 806 aaKnown RBP25.49■■□□□ 1.67
MBD3-211ENST00000592965 OSTNP61366 133 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 IER5LQ5T953 404 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 CD300LGQ6UXG3 332 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms