RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TADA2AO75478 443 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 KRT38O76015 456 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 KRT3P12035 628 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 TOB1P50616 345 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 EPHB1P54762 984 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 DDX56Q9NY93 547 aaKnown RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 RASA1P20936 1047 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 KLK7P49862 253 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 STX1BP61266 288 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 FBXL13Q8NEE6 735 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 TTC17Q96AE7 1141 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 RNF25Q96BH1 459 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 TMEM169Q96HH4 297 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 PNKPQ96T60 521 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 SMYD2Q9NRG4 433 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 ASNSD1Q9NWL6 643 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 RIN2Q8WYP3 895 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 SERPINI1Q99574 410 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 REEP2Q9BRK0 252 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 TIPINQ9BVW5 301 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 MOSPD1Q9UJG1 213 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 PCDHA10Q9Y5I2 948 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 CXCL11O14625 94 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 TMPRSS15P98073 1019 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 STAT4Q14765 748 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 RGMBQ6NW40 437 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 USP38Q8NB14 1042 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 FAM96AQ9H5X1 160 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 JPH1Q9HDC5 661 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-228ENST00000592705 KCND2Q9NZV8 630 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 TTC4O95801 387 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 GNA15P30679 374 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 FMO5P49326 533 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 IRAK1P51617 712 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 TRMT10CQ7L0Y3 403 aaKnown RBP13.48□□□□□ -0.25
DNMT1-228ENST00000592705 HAUS6Q7Z4H7 955 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 WDR75Q8IWA0 830 aaKnown RBP13.48□□□□□ -0.25
DNMT1-228ENST00000592705 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.48□□□□□ -0.258e-8■■■■■ 53
DNMT1-228ENST00000592705 UVRAGQ9P2Y5 699 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 PITPNM2Q9BZ72 1349 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 RAD51CO43502 376 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 RPLP2P05387 115 aaKnown RBP13.48□□□□□ -0.25
DNMT1-228ENST00000592705 COG7P83436 770 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 TSTA3Q13630 321 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-228ENST00000592705 KYAT1Q16773 422 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 GPD1LQ8N335 351 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 NKX2-3Q8TAU0 364 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 SOCS4Q8WXH5 440 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 ZIM3Q96PE6 472 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 STOML1Q9UBI4 398 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 NDUFB10O96000 172 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 CDK17Q00537 523 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 ARL13BQ3SXY8 428 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 IZUMO3Q5VZ72 239 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 ATL2Q8NHH9 583 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 C1orf54Q8WWF1 131 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 HDAC11Q96DB2 347 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 THOC1Q96FV9 657 aaKnown RBP13.48□□□□□ -0.25
DNMT1-228ENST00000592705 YME1L1Q96TA2 773 aa13.48□□□□□ -0.25
DNMT1-228ENST00000592705 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 KRT7P08729 469 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 CEP55Q53EZ4 464 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 RAB44Q7Z6P3 723 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 NOP9Q86U38 636 aaKnown RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 CYP26B1Q9NR63 512 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 DPP7Q9UHL4 492 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 UBE4BO95155 1302 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 HAUS5O94927 633 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 IGFBP4P22692 258 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 LSP1P33241 339 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 CDKAL1Q5VV42 579 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 EFHD1Q9BUP0 239 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 MLXIPLQ9NP71 852 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 SENP1Q9P0U3 644 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 PCDHB7Q9Y5E2 793 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 HOXA2O43364 376 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 PDHBP11177 359 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 CYP2C9P11712 490 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 PRLRP16471 622 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 FGFR4P22455 802 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 GPS1Q13098 491 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 KRT33BQ14525 404 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 LRRC14Q15048 493 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF699Q32M78 642 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 FIGNQ5HY92 759 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 JADE1Q6IE81 842 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 ANKS1AQ92625 1134 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 PPARGC1AQ9UBK2 798 aaKnown RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms