RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 EFEMP2O95967 443 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 PDGFBP01127 241 aaPredicted RBP11.17□□□□□ -0.62
VMP1-214ENST00000592106 CLCN5P51795 746 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 PALB2Q86YC2 1186 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 SNX29Q8TEQ0 813 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 RTP3Q9BQQ7 232 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 TTPALQ9BTX7 342 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 GPR62Q9BZJ7 368 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 BHMT2Q9H2M3 363 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
VMP1-214ENST00000592106 CACNA1AO00555 2505 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 TGM5O43548 720 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 YARSP54577 528 aaKnown RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 DMP1Q13316 513 aaPredicted RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 PSMD5Q16401 504 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 KRT79Q5XKE5 535 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 GET4Q7L5D6 327 aaPredicted RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 CEP57Q86XR8 500 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 GLYCTKQ8IVS8 523 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 GSTCDQ8NEC7 633 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 FLCNQ8NFG4 579 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 HASPINQ8TF76 798 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 PIK3R5Q8WYR1 880 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 BSNDQ8WZ55 320 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 UROC1Q96N76 676 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 CCDC113Q9H0I3 377 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 NT5C3AQ9H0P0 336 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 KCNK12Q9HB15 430 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 DDX19AQ9NUU7 478 aaKnown RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.16□□□□□ -0.62
VMP1-214ENST00000592106 EPS15L1Q9UBC2 864 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 PCDHGA4Q9Y5G9 962 aa11.16□□□□□ -0.62
VMP1-214ENST00000592106 ZFP37Q9Y6Q3 630 aaPredicted RBP11.16□□□□□ -0.62
VMP1-214ENST00000592106 F8W810 466 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 TMEM189-UBE2V1I3L0A0 370 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 K7ERI5 159 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 PTGESO14684 152 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 TRAPPC3O43617 180 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 GFRA3O60609 400 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 XYLBO75191 536 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 RFPL2O75678 378 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 ZMYND10O75800 440 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 KIF4AO95239 1232 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 PAPLNO95428 1278 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 HNRNPA1P09651 372 aaKnown RBP eCLIP11.15□□□□□ -0.62
VMP1-214ENST00000592106 MYBP10242 640 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 HOXA9P31269 272 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 PDIA5Q14554 519 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 ZNF568Q3ZCX4 644 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 PPM1LQ5SGD2 360 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 ATF7IP2Q5U623 682 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 FAM171A1Q5VUB5 890 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 TMEM105Q8N8V8 129 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 B3GALT6Q96L58 329 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 DRC1Q96MC2 740 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 TIPINQ9BVW5 301 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 CCDC94Q9BW85 323 aaPredicted RBP11.15□□□□□ -0.62
VMP1-214ENST00000592106 SMOC2Q9H3U7 446 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 FAM86C1Q9NVL1 165 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 KCNG1Q9UIX4 513 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 FBXW11Q9UKB1 542 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 KIAA1024Q9UPX6 916 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 DNM3Q9UQ16 869 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 GDAQ9Y2T3 454 aa11.15□□□□□ -0.62
VMP1-214ENST00000592106 CCDC169A6NNP5 214 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 H0Y858 1186 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
VMP1-214ENST00000592106 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 SRFP11831 508 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 RPL17P18621 184 aaKnown RBP11.14□□□□□ -0.63
VMP1-214ENST00000592106 AOC1P19801 751 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 FSHRP23945 695 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 U2AF2P26368 475 aaKnown RBP eCLIP11.14□□□□□ -0.63
VMP1-214ENST00000592106 PRPHP41219 470 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 PTGDRQ13258 359 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 RTP2Q5QGT7 225 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 CWF19L1Q69YN2 538 aaKnown RBP11.14□□□□□ -0.63
VMP1-214ENST00000592106 PRSS55Q6UWB4 352 aaPredicted RBP11.14□□□□□ -0.63
VMP1-214ENST00000592106 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 SIX5Q8N196 739 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 IGSF22Q8N9C0 903 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 RABGGTAQ92696 567 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 ZNF707Q96C28 371 aaPredicted RBP11.14□□□□□ -0.63
VMP1-214ENST00000592106 PHOX2BQ99453 314 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 KIFC3Q9BVG8 833 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 MRPL4Q9BYD3 311 aaKnown RBP11.14□□□□□ -0.63
VMP1-214ENST00000592106 C17orf75Q9HAS0 396 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 SLC38A7Q9NVC3 462 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 WNT16Q9UBV4 365 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 TNFSF13BQ9Y275 285 aa11.14□□□□□ -0.63
VMP1-214ENST00000592106 RBM19Q9Y4C8 960 aaKnown RBP11.14□□□□□ -0.63
VMP1-214ENST00000592106 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
VMP1-214ENST00000592106 B3GAT3O94766 335 aa11.13□□□□□ -0.63
VMP1-214ENST00000592106 C8AP07357 584 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms