RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.18■□□□□ 0.985e-6■■■□□ 17.2
MBD3-209ENST00000592012 SLITRK6Q9H5Y7 841 aa21.18■□□□□ 0.98
MBD3-209ENST00000592012 C1orf112Q9NSG2 853 aa21.18■□□□□ 0.98
MBD3-209ENST00000592012 AMACRQ9UHK6 382 aa21.18■□□□□ 0.98
MBD3-209ENST00000592012 ADGRA2Q96PE1 1338 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 ADCY3O60266 1144 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 LDHAP00338 332 aaKnown RBP21.17■□□□□ 0.98
MBD3-209ENST00000592012 KRT5P13647 590 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 ZBTB41Q5SVQ8 909 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.17■□□□□ 0.98
MBD3-209ENST00000592012 RPS6KC1Q96S38 1066 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 MSTO1Q9BUK6 570 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 RBAKQ9NYW8 714 aaPredicted RBP21.17■□□□□ 0.98
MBD3-209ENST00000592012 GTF3C4Q9UKN8 822 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 ZHX1Q9UKY1 873 aaPredicted RBP21.17■□□□□ 0.98
MBD3-209ENST00000592012 LRRC37A2A6NM11 1700 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 MIF4GDA9UHW6 222 aaKnown RBP21.17■□□□□ 0.98
MBD3-209ENST00000592012 HLA-DRAP01903 254 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 POU5F1Q01860 360 aaKnown RBP21.17■□□□□ 0.98
MBD3-209ENST00000592012 PPIL2Q13356 520 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 WHAMMQ8TF30 809 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 PRPF31Q8WWY3 499 aaKnown RBP21.17■□□□□ 0.98
MBD3-209ENST00000592012 SH3GL2Q99962 352 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 ANKFY1Q9P2R3 1169 aa21.17■□□□□ 0.98
MBD3-209ENST00000592012 VNN1O95497 513 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 ECHS1P30084 290 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 NF2P35240 595 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 MESDQ14696 234 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 HSDL1Q3SXM5 330 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 WDR44Q5JSH3 913 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 ACAD10Q6JQN1 1059 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 MREGQ8N565 214 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 KRT35Q92764 455 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 AZI2Q9H6S1 392 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 TRPC6Q9Y210 931 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 DNAJC25-GNG10A0A024R161 153 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 ERICH4A6NGS2 130 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 CLSTN1O94985 981 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 COMTP21964 271 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 LMAN1P49257 510 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 GUCY2FP51841 1108 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 ZNF211Q13398 564 aaPredicted RBP21.16■□□□□ 0.98
MBD3-209ENST00000592012 CUL1Q13616 776 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 TTLL12Q14166 644 aaPredicted RBP21.16■□□□□ 0.98
MBD3-209ENST00000592012 MAATS1Q7Z4T9 603 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 IQCKQ8N0W5 287 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 CCDC26Q8TAB7 109 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 NAP1L3Q99457 506 aaPredicted RBP21.16■□□□□ 0.98
MBD3-209ENST00000592012 GPR20Q99678 358 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 NUP85Q9BW27 656 aa21.16■□□□□ 0.98
MBD3-209ENST00000592012 TMEM110-MUSTN1A8MSY1 372 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 CALCAP01258 141 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 PEX5P50542 639 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 KCNV1Q6PIU1 500 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 ZNF564Q8TBZ8 553 aaPredicted RBP21.15■□□□□ 0.98
MBD3-209ENST00000592012 ZNF653Q96CK0 615 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 FAM167AQ96KS9 214 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 MPHOSPH6Q99547 160 aaKnown RBP21.15■□□□□ 0.98
MBD3-209ENST00000592012 ZSWIM1Q9BR11 485 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 CNTNAP2Q9UHC6 1331 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 TTLL13PA6NNM8 815 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 BIRC3Q13489 604 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 CLEC16AQ2KHT3 1053 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 CELF3Q5SZQ8 465 aaKnown RBP21.15■□□□□ 0.98
MBD3-209ENST00000592012 C9orf131Q5VYM1 1079 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 SPOPLQ6IQ16 392 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 UBL4BQ8N7F7 174 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 MORC4Q8TE76 937 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 BBXQ8WY36 941 aaPredicted RBP21.15■□□□□ 0.98
MBD3-209ENST00000592012 GLG1Q92896 1179 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 CD101Q93033 1021 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 OPTNQ96CV9 577 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 UVRAGQ9P2Y5 699 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 PCDHB2Q9Y5E7 798 aa21.15■□□□□ 0.98
MBD3-209ENST00000592012 HSF2BPO75031 334 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 UNGP13051 313 aaPredicted RBP21.14■□□□□ 0.97
MBD3-209ENST00000592012 PIK3CAP42336 1068 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 MARCKSL1P49006 195 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 MKRN4PQ13434 485 aaPredicted RBP21.14■□□□□ 0.97
MBD3-209ENST00000592012 NAA35Q5VZE5 725 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 DDX42Q86XP3 938 aaKnown RBP eCLIP21.14■□□□□ 0.97
MBD3-209ENST00000592012 SEC14L1Q92503 715 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 MCM3APO60318 1980 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 ZBTB42B2RXF5 422 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 TTI1O43156 1089 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 LGR5O75473 907 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 MARK3P27448 753 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 COPB2P35606 906 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 PTENP60484 403 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 IER5Q5VY09 327 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 AADACL2Q6P093 401 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 ZPBP2Q6X784 338 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 TRIM50Q86XT4 487 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 BTBD6Q96KE9 485 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 ZIM3Q96PE6 472 aa21.14■□□□□ 0.97
MBD3-209ENST00000592012 CELF4Q9BZC1 486 aaKnown RBP21.14■□□□□ 0.97
MBD3-209ENST00000592012 APOBEC3GQ9HC16 384 aaKnown RBP21.14■□□□□ 0.97
MBD3-209ENST00000592012 CLDN3O15551 220 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 MSCO60682 206 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms