RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 PRR16Q569H4 304 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 PRR23BQ6ZRT6 265 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 ST13P5Q8NFI4 369 aaPredicted RBP11.34□□□□□ -0.59
SDF2-209ENST00000591903 RDM1Q8NG50 284 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 TBCKQ8TEA7 893 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 NLRP4Q96MN2 994 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 RIT2Q99578 217 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 CHRDQ9H2X0 955 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 FBXW11Q9UKB1 542 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 RALYQ9UKM9 306 aaKnown RBP11.34□□□□□ -0.59
SDF2-209ENST00000591903 KCNH3Q9ULD8 1083 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 ATP6V1DQ9Y5K8 247 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 NOTCH4Q99466 2003 aa11.34□□□□□ -0.59
SDF2-209ENST00000591903 SPAG17Q6Q759 2223 aa11.33□□□□□ -0.59
SDF2-209ENST00000591903 ASPMQ8IZT6 3477 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 LAD1O00515 517 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 MAFO75444 373 aaPredicted RBP11.33□□□□□ -0.6
SDF2-209ENST00000591903 ECI2O75521 394 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
SDF2-209ENST00000591903 KCNA4P22459 653 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 NR5A1Q13285 461 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 FZD5Q13467 585 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 PCBP1Q15365 356 aaKnown RBP eCLIP11.33□□□□□ -0.6
SDF2-209ENST00000591903 LPAL2Q16609 132 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 UGCGQ16739 394 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 Q4G0T1 1027 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 PPM1LQ5SGD2 360 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 FUT10Q6P4F1 479 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.33□□□□□ -0.6
SDF2-209ENST00000591903 EXOC8Q8IYI6 725 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 CEP89Q96ST8 783 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 KXD1Q9BQD3 176 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 IFT122Q9HBG6 1241 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 GJB4Q9NTQ9 266 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 F5P12259 2224 aa11.33□□□□□ -0.6
SDF2-209ENST00000591903 PDCD11Q14690 1871 aaKnown RBP11.33□□□□□ -0.6
SDF2-209ENST00000591903 ARL5CA6NH57 179 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 GAS7O60861 476 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 C8AP07357 584 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 AXLP30530 894 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 SIM2Q14190 667 aaPredicted RBP11.32□□□□□ -0.6
SDF2-209ENST00000591903 UBXN11Q5T124 520 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
SDF2-209ENST00000591903 PIK3AP1Q6ZUJ8 805 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 RTL10Q7L3V2 364 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 GLYCTKQ8IVS8 523 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 NPAS3Q8IXF0 933 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 HACE1Q8IYU2 909 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 TEKT3Q9BXF9 490 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 GPR62Q9BZJ7 368 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 HEBP1Q9NRV9 189 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 ADAM28Q9UKQ2 775 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 TICRRQ7Z2Z1 1910 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 PKD1L2Q7Z442 2459 aa11.32□□□□□ -0.6
SDF2-209ENST00000591903 SF3B1O75533 1304 aaKnown RBP eCLIP11.32□□□□□ -0.6
SDF2-209ENST00000591903 ZMYM2Q9UBW7 1377 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 FASNP49327 2511 aaKnown RBP11.31□□□□□ -0.6
SDF2-209ENST00000591903 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
SDF2-209ENST00000591903 CHMP2AO43633 222 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 ERLIN2O94905 339 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 F13A1P00488 732 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
SDF2-209ENST00000591903 MLH1P40692 756 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 NTHL1P78549 312 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 GUCY1B3Q02153 619 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 RESTQ13127 1097 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 INF2Q27J81 1249 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 UVSSAQ2YD98 709 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 AASDHQ4L235 1098 aaPredicted RBP11.31□□□□□ -0.6
SDF2-209ENST00000591903 LRCH2Q5VUJ6 765 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 PDXDC1Q6P996 788 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 SLFN12Q8IYM2 578 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 ITFG1Q8TB96 612 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 LENG9Q96B70 501 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 FAM20AQ96MK3 541 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 GAD1Q99259 594 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 GDE1Q9NZC3 331 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 GIT1Q9Y2X7 761 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 PPME1Q9Y570 386 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 IPPQ9Y573 584 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 COL4A3BPQ9Y5P4 624 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 COL4A2P08572 1712 aa11.31□□□□□ -0.6
SDF2-209ENST00000591903 FRYQ5TBA9 3013 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 ADAMTS3O15072 1205 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 MSH4O15457 936 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 GDF9O60383 454 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
SDF2-209ENST00000591903 CXCL12P48061 93 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 SCNN1GP51170 649 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
SDF2-209ENST00000591903 PABPC1LQ4VXU2 614 aaKnown RBP11.3□□□□□ -0.6
SDF2-209ENST00000591903 MCTP1Q6DN14 999 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 MIER3Q7Z3K6 550 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms