RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 HAPLN2Q9GZV7 340 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 RNF39Q9H2S5 420 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 PTPRHQ9HD43 1115 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 EXOC1Q9NV70 894 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 FAM86C1Q9NVL1 165 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 TNFSF13BQ9Y275 285 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 PCDHB12Q9Y5F1 795 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 PCDHGC5Q9Y5F6 944 aa23.51■■□□□ 1.35
R3HDM4-206ENST00000590454 N4BP3O15049 544 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 PER2O15055 1255 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 FGFR1P11362 822 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 MCM4P33991 863 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 STK4Q13043 487 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 CAMK4Q16566 473 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 L1TD1Q5T7N2 865 aaKnown RBP23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 SLC27A1Q6PCB7 646 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 EPM2AIP1Q7L775 607 aaPredicted RBP23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 KIAA0895Q8NCT3 520 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 CCDC51Q96ER9 411 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 AAASQ9NRG9 546 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 PCDHA5Q9Y5H7 936 aa23.5■■□□□ 1.35
R3HDM4-206ENST00000590454 ANKRD63C9JTQ0 380 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 GOLGA6L22H0YM25 854 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 PROZP22891 400 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 SPOUT1Q5T280 376 aaKnown RBP23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 ZBTB33Q86T24 672 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 ELOA2Q8IYF1 753 aaPredicted RBP23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 BICD1Q96G01 975 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 NXF3Q9H4D5 531 aaKnown RBP23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 TLR9Q9NR96 1032 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 TMEM161AQ9NX61 479 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 IPPQ9Y573 584 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 PCDHB7Q9Y5E2 793 aa23.49■■□□□ 1.35
R3HDM4-206ENST00000590454 ZNF623O75123 536 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 RHOBTB3O94955 611 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 PIGRP01833 764 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 NUBP1P53384 320 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 PTPN21Q16825 1174 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 FAM43BQ6ZT52 329 aaPredicted RBP23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 MRPL10Q7Z7H8 261 aaKnown RBP23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 SCFD1Q8WVM8 642 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 CDT1Q9H211 546 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 ELAC1Q9H777 363 aaKnown RBP23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 RNF216Q9NWF9 866 aaPredicted RBP23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 ANKFY1Q9P2R3 1169 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 GDAQ9Y2T3 454 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 PCDHB13Q9Y5F0 798 aa23.48■■□□□ 1.35
R3HDM4-206ENST00000590454 HNRNPDLO14979 420 aaKnown RBP23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 SRGAP2BP0DMP2 458 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 DUSP6Q16828 381 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 ZNF568Q3ZCX4 644 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 CLLU1OSQ5K130 101 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 PDE12Q6L8Q7 609 aaKnown RBP23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 ZPBP2Q6X784 338 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 AGMOQ6ZNB7 445 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 CEP120Q8N960 986 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 SPATA20Q8TB22 786 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 HVCN1Q96D96 273 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 CCDC34Q96HJ3 373 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 ACCSQ96QU6 501 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 APOL6Q9BWW8 343 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 ZMYM2Q9UBW7 1377 aa23.47■■□□□ 1.35
R3HDM4-206ENST00000590454 TRIOO75962 3097 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 TOM1L1O75674 476 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 HARSP12081 509 aaKnown RBP23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 SCP2P22307 547 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 AKAP5P24588 427 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 LIG4P49917 911 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 RAB27AP51159 221 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 AFF1P51825 1210 aaKnown RBP23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 RBM10P98175 930 aaKnown RBP23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 FOXK2Q01167 660 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 KCNB1Q14721 858 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 ISM2Q6H9L7 571 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 MPZL3Q6UWV2 235 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 NELFCDQ8IXH7 590 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 SMYD4Q8IYR2 804 aaPredicted RBP23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 VN1R2Q8NFZ6 395 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 ZNF507Q8TCN5 953 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 TRIM6Q9C030 488 aaPredicted RBP23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 CXCL16Q9H2A7 254 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 CLSTN2Q9H4D0 955 aa23.46■■□□□ 1.35
R3HDM4-206ENST00000590454 FNDC1Q4ZHG4 1894 aaPredicted RBP23.45■■□□□ 1.35
R3HDM4-206ENST00000590454 FGF18O76093 207 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 EOMESO95936 686 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 PSMD2Q13200 908 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 ALCAMQ13740 583 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 SEZ6Q53EL9 994 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 TMEM184AQ6ZMB5 413 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 HELQQ8TDG4 1101 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 SMARCE1Q969G3 411 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 RIPOR3Q96MK2 946 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 CASD1Q96PB1 797 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 ADPGKQ9BRR6 497 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 TCHPQ9BT92 498 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 SNTG2Q9NY99 539 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 HCSTQ9UBK5 93 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 HOOK1Q9UJC3 728 aaKnown RBP23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 KMT2EQ8IZD2 1858 aa23.45■■□□□ 1.34
R3HDM4-206ENST00000590454 EIF3DO15371 548 aaKnown RBP eCLIP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms