RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
ATG4D-211ENST00000589753 IRF2BP1Q8IU81 584 aa16.49■□□□□ 0.23
ATG4D-211ENST00000589753 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
ATG4D-211ENST00000589753 CD302Q8IX05 232 aa16.49■□□□□ 0.23
ATG4D-211ENST00000589753 SNX27Q96L92 541 aa16.49■□□□□ 0.23
ATG4D-211ENST00000589753 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
ATG4D-211ENST00000589753 GDF15Q99988 308 aa16.49■□□□□ 0.23
ATG4D-211ENST00000589753 METTL14Q9HCE5 456 aaKnown RBP16.49■□□□□ 0.23
ATG4D-211ENST00000589753 CXXC1Q9P0U4 656 aaPredicted RBP16.49■□□□□ 0.23
ATG4D-211ENST00000589753 MAGEC2Q9UBF1 373 aaPredicted RBP16.49■□□□□ 0.23
ATG4D-211ENST00000589753 ARMCX3Q9UH62 379 aaPredicted RBP16.49■□□□□ 0.23
ATG4D-211ENST00000589753 LACTBL1A8MY62 500 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 GOLGA6L19H0YKK7 550 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 MEFVO15553 781 aaPredicted RBP16.48■□□□□ 0.23
ATG4D-211ENST00000589753 FGFR1P11362 822 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 MLH1P40692 756 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 MARSP56192 900 aaKnown RBP16.48■□□□□ 0.23
ATG4D-211ENST00000589753 TPM4P67936 248 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 BFSP1Q12934 665 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 PSMD6Q15008 389 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 CDKAL1Q5VV42 579 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 GLB1LQ6UWU2 654 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 USP37Q86T82 979 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 GAS2L3Q86XJ1 694 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 RNF214Q8ND24 703 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 HELQQ8TDG4 1101 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 CCDC127Q96BQ5 260 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 BORCS6Q96GS4 357 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 ZFP42Q96MM3 310 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 FNBP1Q96RU3 617 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 RPS6KC1Q96S38 1066 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 GAD1Q99259 594 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
ATG4D-211ENST00000589753 ASB7Q9H672 318 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 PDE11AQ9HCR9 933 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 RNF19AQ9NV58 838 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 CNTN3Q9P232 1028 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 SLC4A7Q9Y6M7 1214 aa16.48■□□□□ 0.23
ATG4D-211ENST00000589753 TTC3P53804 2025 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 ARL5CA6NH57 179 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 KCNJ18B7U540 433 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 OFD1O75665 1012 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 EEF1GP26641 437 aaKnown RBP16.47■□□□□ 0.23
ATG4D-211ENST00000589753 VAMP7P51809 220 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 WNT7BP56706 349 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 ENPEPQ07075 957 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 KCNJ12Q14500 433 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 XKR4Q5GH76 650 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 CLLU1OSQ5K130 101 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 C9orf50Q5SZB4 431 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 RASIP1Q5U651 963 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 ABI1Q8IZP0 508 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 PLEKHO2Q8TD55 490 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 PARD3BQ8TEW8 1205 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 RNPC3Q96LT9 517 aaKnown RBP16.47■□□□□ 0.23
ATG4D-211ENST00000589753 SLC9A7Q96T83 725 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 CXCL16Q9H2A7 254 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 HSD3B7Q9H2F3 369 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 INPP5FQ9Y2H2 1132 aa16.47■□□□□ 0.23
ATG4D-211ENST00000589753 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 SMIM28A0A1B0GU29 152 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 INPPL1O15357 1258 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 DLATP10515 647 aaKnown RBP16.46■□□□□ 0.23
ATG4D-211ENST00000589753 KCNE1P15382 129 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 ZNF18P17022 549 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.23
ATG4D-211ENST00000589753 MTIF2P46199 727 aaKnown RBP16.46■□□□□ 0.23
ATG4D-211ENST00000589753 SCNN1GP51170 649 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 MCCD1P59942 119 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-211ENST00000589753 SPAG1Q07617 926 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 SHHQ15465 462 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 TCP11X2Q5H9J9 407 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 TMCO2Q7Z6W1 182 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-211ENST00000589753 GSTCDQ8NEC7 633 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 PHOSPHO2Q8TCD6 241 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 URGCPQ8TCY9 931 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 RSPH1Q8WYR4 309 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 TSPAN18Q96SJ8 248 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 CGRRF1Q99675 332 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 TMEM117Q9H0C3 514 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 DERAQ9Y315 318 aa16.46■□□□□ 0.23
ATG4D-211ENST00000589753 LRRIQ3A6PVS8 624 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-211ENST00000589753 PTGESO14684 152 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 DGKIO75912 1065 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 POMCP01189 267 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 NFICP08651 508 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 ATP2A2P16615 1042 aaKnown RBP16.45■□□□□ 0.22
ATG4D-211ENST00000589753 TNNI1P19237 187 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 BMP8BP34820 402 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 GATMP50440 423 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 AFF1P51825 1210 aaKnown RBP16.45■□□□□ 0.22
ATG4D-211ENST00000589753 DLG4P78352 724 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 TMEM132DQ14C87 1099 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 DCAF17Q5H9S7 520 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-211ENST00000589753 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 GLRA4Q5JXX5 417 aa16.45■□□□□ 0.22
ATG4D-211ENST00000589753 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms