RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 SPATA32Q96LK8 384 aa18.48■□□□□ 0.55
H3F3B-208ENST00000589599 HERC2P3Q9BVR0 1158 aa18.48■□□□□ 0.55
H3F3B-208ENST00000589599 SLC38A7Q9NVC3 462 aa18.48■□□□□ 0.55
H3F3B-208ENST00000589599 PANK4Q9NVE7 773 aa18.48■□□□□ 0.55
H3F3B-208ENST00000589599 CLEC1BQ9P126 229 aa18.48■□□□□ 0.55
H3F3B-208ENST00000589599 ADAM28Q9UKQ2 775 aa18.48■□□□□ 0.55
H3F3B-208ENST00000589599 POLR2DO15514 142 aaKnown RBP18.47■□□□□ 0.55
H3F3B-208ENST00000589599 KCNE1P15382 129 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 GLUD2P49448 558 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 COASYQ13057 564 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 SMAD4Q13485 552 aaKnown RBP18.47■□□□□ 0.55
H3F3B-208ENST00000589599 PTPN14Q15678 1187 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 E2F4Q16254 413 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 ZC2HC1CQ53FD0 456 aaPredicted RBP18.47■□□□□ 0.55
H3F3B-208ENST00000589599 XKR4Q5GH76 650 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 GLRA4Q5JXX5 417 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 RESP18Q5W5W9 173 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 SLFN12LQ6IEE8 588 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 LLGL2Q6P1M3 1020 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 ALKAL1Q6UXT8 129 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 PPFIBP1Q86W92 1011 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 MAP4K3Q8IVH8 894 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 RABGGTAQ92696 567 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 CASP10Q92851 521 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 MSLNLQ96KJ4 702 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 UROC1Q96N76 676 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 PPP1R10Q96QC0 940 aaKnown RBP18.47■□□□□ 0.55
H3F3B-208ENST00000589599 FIZ1Q96SL8 496 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 CXCL16Q9H2A7 254 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 MAGEF1Q9HAY2 307 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 KBTBD4Q9NVX7 518 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 BARX2Q9UMQ3 279 aaPredicted RBP18.47■□□□□ 0.55
H3F3B-208ENST00000589599 EXOC7Q9UPT5 735 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 PCDHB13Q9Y5F0 798 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 VCANP13611 3396 aa18.47■□□□□ 0.55
H3F3B-208ENST00000589599 SF3B1O75533 1304 aaKnown RBP eCLIP18.47■□□□□ 0.554e-7■■■■■ 28.9
H3F3B-208ENST00000589599 C2CD2LO14523 706 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 GLP2RO95838 553 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 ALCAMQ13740 583 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 NAB2Q15742 525 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 USP41Q3LFD5 358 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 FUT10Q6P4F1 479 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 DCLRE1AQ6PJP8 1040 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 TAS1R1Q7RTX1 841 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 VN1R2Q8NFZ6 395 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 LEO1Q8WVC0 666 aaPredicted RBP18.46■□□□□ 0.55
H3F3B-208ENST00000589599 STAMQ92783 540 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
H3F3B-208ENST00000589599 SNX27Q96L92 541 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 MSTO1Q9BUK6 570 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 SCAND2PQ9GZW5 306 aaPredicted RBP18.46■□□□□ 0.55
H3F3B-208ENST00000589599 PLEKHA5Q9HAU0 1116 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 OLFML3Q9NRN5 406 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 TBC1D7Q9P0N9 293 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 KCNH3Q9ULD8 1083 aa18.46■□□□□ 0.55
H3F3B-208ENST00000589599 BRWD1Q9NSI6 2320 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 F8W810 466 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 OGTO15294 1046 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 EFEMP2O95967 443 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 HOXB8P17481 243 aaPredicted RBP18.45■□□□□ 0.54
H3F3B-208ENST00000589599 KLRC2P26717 231 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 NUCB2P80303 420 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 ELAVL2Q12926 359 aaKnown RBP18.45■□□□□ 0.54
H3F3B-208ENST00000589599 KCNC3Q14003 757 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 SEZ6Q53EL9 994 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 KIAA0319Q5VV43 1072 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 ANKRD54Q6NXT1 300 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 STXBP4Q6ZWJ1 553 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 KLHL5Q96PQ7 755 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 ACCSQ96QU6 501 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 PAAF1Q9BRP4 392 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 GPR62Q9BZJ7 368 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 CNTN3Q9P232 1028 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.45■□□□□ 0.54
H3F3B-208ENST00000589599 HCFC2Q9Y5Z7 792 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 CUL9Q8IWT3 2517 aa18.45■□□□□ 0.54
H3F3B-208ENST00000589599 A0A0B4J269 797 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 FRMD3A2A2Y4 597 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 TNFRSF10AO00220 468 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 MBTPS2O43462 519 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 LILRB3O75022 631 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 B3GAT3O94766 335 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 GCNT3O95395 438 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 CNPP09543 421 aaKnown RBP18.44■□□□□ 0.54
H3F3B-208ENST00000589599 IL9P15248 144 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 CMA1P23946 247 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 RBM10P98175 930 aaKnown RBP18.44■□□□□ 0.54
H3F3B-208ENST00000589599 DSG1Q02413 1049 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 CREMQ03060 361 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 POSTNQ15063 836 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 SLC10A6Q3KNW5 377 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 TPRNQ4KMQ1 711 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 ADALQ6DHV7 355 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 GPR65Q8IYL9 337 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 RNF168Q8IYW5 571 aaPredicted RBP18.44■□□□□ 0.54
H3F3B-208ENST00000589599 CEP57L1Q8IYX8 460 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 SYCP3Q8IZU3 236 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 NECAB3Q96P71 396 aaPredicted RBP18.44■□□□□ 0.54
H3F3B-208ENST00000589599 TRIM9Q9C026 710 aa18.44■□□□□ 0.54
H3F3B-208ENST00000589599 HAPLN2Q9GZV7 340 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms