RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 GPRASP2Q96D09 838 aa7.96□□□□□ -1.13
ZNF540-206ENST00000589117 ZBED3Q96IU2 234 aaPredicted RBP7.96□□□□□ -1.13
ZNF540-206ENST00000589117 BCAS3Q9H6U6 928 aa7.96□□□□□ -1.13
ZNF540-206ENST00000589117 KIAA1586Q9HCI6 787 aa7.96□□□□□ -1.13
ZNF540-206ENST00000589117 ZNF358Q9NW07 568 aa7.96□□□□□ -1.13
ZNF540-206ENST00000589117 PIM2Q9P1W9 311 aa7.96□□□□□ -1.13
ZNF540-206ENST00000589117 PARP2Q9UGN5 583 aa7.96□□□□□ -1.13
ZNF540-206ENST00000589117 AJAP1Q9UKB5 411 aaPredicted RBP7.96□□□□□ -1.13
ZNF540-206ENST00000589117 MTUS1Q9ULD2 1270 aa7.96□□□□□ -1.13
ZNF540-206ENST00000589117 FAM187AA6NFU0 413 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 TMEM229AB2RXF0 380 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 PODXLO00592 558 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 HRO43593 1189 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 STAM2O75886 525 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 KRT14P02533 472 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 FAM153BP0C7A2 387 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 CTNNA1P35221 906 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 GCLMP48507 274 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 EIF3BP55884 814 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 GNGT1P63211 74 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 MRPS9P82933 396 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 PPATQ06203 517 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 ITGB3BPQ13352 177 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 AGERQ15109 404 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 SNRNP35Q16560 246 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 FAM153CQ494X1 144 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 EMC10Q5UCC4 262 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 NSMFQ6X4W1 530 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 CROCCP2Q86T23 111 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 PPM1KQ8N3J5 372 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 LMO3Q8TAP4 145 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 BCAS4Q8TDM0 211 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 IFT74Q96LB3 600 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 ATP6V1G3Q96LB4 118 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 RNPC3Q96LT9 517 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 CAMKK2Q96RR4 588 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 CEP89Q96ST8 783 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 PDCD2LQ9BRP1 358 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 NTPCRQ9BSD7 190 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 SYT11Q9BT88 431 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 MOV10L1Q9BXT6 1211 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 GLIS2Q9BZE0 524 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 DDX47Q9H0S4 455 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 THAP2Q9H0W7 228 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 WNT8AQ9H1J5 351 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 OSGEPQ9NPF4 335 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 KMT5AQ9NQR1 393 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 PXMP2Q9NR77 195 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 PICK1Q9NRD5 415 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 AMACRQ9UHK6 382 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 FAM153AQ9UHL3 310 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 TBX20Q9UMR3 447 aa7.96□□□□□ -1.14
ZNF540-206ENST00000589117 RRP15Q9Y3B9 282 aaKnown RBP7.96□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF646O15015 1829 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 RGPD3A6NKT7 1758 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 RGPD4Q7Z3J3 1758 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 TULP2O00295 520 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 EIF3HO15372 352 aaKnown RBP eCLIP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 SLC16A4O15374 487 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 PSAPP07602 524 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 DPEP1P16444 411 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 NR1D1P20393 614 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 CNGA1P29973 690 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 OAZ1P54368 228 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 PTENP60484 403 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 TGFB2P61812 414 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 DR1Q01658 176 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 GNPTABQ3T906 1256 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 EPC2Q52LR7 807 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 BRDTQ58F21 947 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 ODF2Q5BJF6 829 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 CEP85LQ5SZL2 805 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 SEL1L2Q5TEA6 688 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 KDM7AQ6ZMT4 941 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 SRLQ86TD4 932 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 EFCAB13Q8IY85 973 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 FAM71AQ8IYT1 594 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 RPUSD2Q8IZ73 545 aaKnown RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 TNS4Q8IZW8 715 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 NSUN6Q8TEA1 469 aaKnown RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 NT5C1BQ96P26 610 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 TAAR1Q96RJ0 339 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 SENP7Q9BQF6 1050 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 CBWD1Q9BRT8 395 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 GPR88Q9GZN0 384 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 RASSF4Q9H2L5 321 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 IKZF4Q9H2S9 585 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 GOLPH3Q9H4A6 298 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 RPAP3Q9H6T3 665 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 TMEM8AQ9HCN3 771 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 COL20A1Q9P218 1284 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 PGAP2Q9UHJ9 254 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 PLAAQ9Y263 795 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 ALG6Q9Y672 507 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 ZSCAN5CA6NGD5 496 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 VWA5AO00534 786 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 KIAA0391O15091 583 aaKnown RBP7.95□□□□□ -1.14
ZNF540-206ENST00000589117 DGAT1O75907 488 aa7.95□□□□□ -1.14
ZNF540-206ENST00000589117 VCAM1P19320 739 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms