RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
CNN1-207ENST00000588468 USP20Q9Y2K6 914 aa10.9□□□□□ -0.66
CNN1-207ENST00000588468 CASTOR2A6NHX0 329 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 HNRNPDLO14979 420 aaKnown RBP10.89□□□□□ -0.67
CNN1-207ENST00000588468 SPTLC2O15270 562 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 LILRB3O75022 631 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 F13A1P00488 732 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 CNPP09543 421 aaKnown RBP10.89□□□□□ -0.67
CNN1-207ENST00000588468 DDIT3P35638 169 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 STAT6P42226 847 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 RBM10P98175 930 aaKnown RBP10.89□□□□□ -0.67
CNN1-207ENST00000588468 CACNB1Q02641 598 aaPredicted RBP10.89□□□□□ -0.67
CNN1-207ENST00000588468 MCL1Q07820 350 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 DHX8Q14562 1220 aaKnown RBP10.89□□□□□ -0.67
CNN1-207ENST00000588468 CBX2Q14781 532 aaPredicted RBP10.89□□□□□ -0.67
CNN1-207ENST00000588468 RRAGBQ5VZM2 374 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 KIAA1841Q6NSI8 718 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 CES5AQ6NT32 575 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 PDXDC1Q6P996 788 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 SYCE2Q6PIF2 218 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 USP49Q70CQ1 688 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 MYCT1Q8N699 235 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 CEP120Q8N960 986 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 SLC22A17Q8WUG5 538 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 HVCN1Q96D96 273 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 BICD1Q96G01 975 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 CLIC6Q96NY7 704 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 ACAP3Q96P50 834 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 C1QTNF1Q9BXJ1 281 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 ST6GALNAC4Q9H4F1 302 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 SFXN1Q9H9B4 322 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 RXFP1Q9HBX9 757 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 CNTN3Q9P232 1028 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 DPP7Q9UHL4 492 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 TCHHQ07283 1943 aa10.89□□□□□ -0.67
CNN1-207ENST00000588468 F8W810 466 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 CLDN3O15551 220 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 TRAK2O60296 914 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 TADA2AO75478 443 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 KIF4AO95239 1232 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 KCNE1P15382 129 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 EPCAMP16422 314 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 GAP43P17677 238 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 KLRC2P26717 231 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 MTHFRP42898 656 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 LIG4P49917 911 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 CLCN4P51793 760 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 GLRA4Q5JXX5 417 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 SPECC1Q5M775 1068 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 KIAA0319Q5VV43 1072 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 SV2BQ7L1I2 683 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 ZBTB33Q86T24 672 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 MAP4K3Q8IVH8 894 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 KCNG4Q8TDN1 519 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 FBXL18Q96ME1 805 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 RIPOR3Q96MK2 946 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 KLHL5Q96PQ7 755 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 PHF7Q9BWX1 381 aaPredicted RBP10.88□□□□□ -0.67
CNN1-207ENST00000588468 S1PR5Q9H228 398 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 ADAM7Q9H2U9 754 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 CD320Q9NPF0 282 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 FNIP2Q9P278 1114 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 TBX20Q9UMR3 447 aa10.88□□□□□ -0.67
CNN1-207ENST00000588468 SMIM28A0A1B0GU29 152 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 LOC730098B7Z3J9 87 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 C2CD2LO14523 706 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 TEX28O15482 410 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 CUTAO60888 179 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 GLUD1P00367 558 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 CLTAP09496 248 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 HARSP12081 509 aaKnown RBP10.87□□□□□ -0.67
CNN1-207ENST00000588468 ALADP13716 330 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 MATR3P43243 847 aaKnown RBP eCLIP10.87□□□□□ -0.67
CNN1-207ENST00000588468 GTF2BQ00403 316 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 ALCAMQ13740 583 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 DCLRE1AQ6PJP8 1040 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 ALKAL1Q6UXT8 129 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.87□□□□□ -0.67
CNN1-207ENST00000588468 CMASQ8NFW8 434 aaPredicted RBP10.87□□□□□ -0.67
CNN1-207ENST00000588468 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 DDX12PQ92771 950 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
CNN1-207ENST00000588468 TSPAN18Q96SJ8 248 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 PAAF1Q9BRP4 392 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 RHOBTB2Q9BYZ6 727 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 GPR62Q9BZJ7 368 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 PLEKHA5Q9HAU0 1116 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 MAGEF1Q9HAY2 307 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 OLFML3Q9NRN5 406 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 DOCK8Q8NF50 2099 aa10.87□□□□□ -0.67
CNN1-207ENST00000588468 TSC2P49815 1807 aa10.86□□□□□ -0.67
CNN1-207ENST00000588468 FRMD3A2A2Y4 597 aa10.86□□□□□ -0.67
CNN1-207ENST00000588468 MYMKA6NI61 221 aa10.86□□□□□ -0.67
CNN1-207ENST00000588468 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms