RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 CREMQ03060 361 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 ATAT1Q5SQI0 421 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 ZPBP2Q6X784 338 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 CEP120Q8N960 986 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 HASPINQ8TF76 798 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 RIN2Q8WYP3 895 aaPredicted RBP21.42■■□□□ 1.02
TPM4-208ENST00000588410 B3GALT6Q96L58 329 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 USP28Q96RU2 1077 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 CXCL16Q9H2A7 254 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 SFXN1Q9H9B4 322 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 PARVGQ9HBI0 331 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 RXFP1Q9HBX9 757 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 CHST7Q9NS84 486 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 MUC3AQ02505 3323 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 K7ENM7 598 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 KIF4AO95239 1232 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 BRD1O95696 1058 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 SCP2P22307 547 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 PROZP22891 400 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 NCKAP1LP55160 1127 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 ELAVL2Q12926 359 aaKnown RBP21.41■■□□□ 1.02
TPM4-208ENST00000588410 SLC39A14Q15043 492 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 NAB2Q15742 525 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 RRAGBQ5VZM2 374 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 HAUS6Q7Z4H7 955 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 GPR65Q8IYL9 337 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 KRI1Q8N9T8 703 aaKnown RBP21.41■■□□□ 1.02
TPM4-208ENST00000588410 LRRC15Q8TF66 581 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 UROC1Q96N76 676 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 CLIC6Q96NY7 704 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 TSHZ2Q9NRE2 1034 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 SLC38A7Q9NVC3 462 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 NR2E1Q9Y466 385 aa21.41■■□□□ 1.02
TPM4-208ENST00000588410 SMIM28A0A1B0GU29 152 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 FAM86C2PA6NEL3 165 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 CLDN3O15551 220 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 GPR37L1O60883 481 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 GLUD1P00367 558 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 WEE2P0C1S8 567 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 NOLC1Q14978 699 aaKnown RBP eCLIP21.4■■□□□ 1.02
TPM4-208ENST00000588410 STK38Q15208 465 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 FAM171A1Q5VUB5 890 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 TMC5Q6UXY8 1006 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 USP49Q70CQ1 688 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 CEP57Q86XR8 500 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 ZBTB45Q96K62 511 aaPredicted RBP21.4■■□□□ 1.02
TPM4-208ENST00000588410 ZNF396Q96N95 335 aaPredicted RBP21.4■■□□□ 1.02
TPM4-208ENST00000588410 PPP1R10Q96QC0 940 aaKnown RBP21.4■■□□□ 1.02
TPM4-208ENST00000588410 TTPALQ9BTX7 342 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 STK17AQ9UEE5 414 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 MUTYHQ9UIF7 546 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 BDP1A6H8Y1 2624 aa21.4■■□□□ 1.02
TPM4-208ENST00000588410 ABLIM1O14639 778 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 TRAK2O60296 914 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 PDIA4P13667 645 aaKnown RBP21.39■■□□□ 1.01
TPM4-208ENST00000588410 LIG4P49917 911 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 ZNF131P52739 623 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 KANK3Q6NY19 840 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 DCLRE1AQ6PJP8 1040 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 SNX27Q96L92 541 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 LRFN3Q9BTN0 628 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 MAN1C1Q9NR34 630 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 FNIP2Q9P278 1114 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 CDH22Q9UJ99 828 aa21.39■■□□□ 1.01
TPM4-208ENST00000588410 MORC2Q9Y6X9 1032 aaPredicted RBP21.39■■□□□ 1.01
TPM4-208ENST00000588410 B3GAT3O94766 335 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 COL9A1P20849 921 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 SP100P23497 879 aaPredicted RBP21.38■■□□□ 1.01
TPM4-208ENST00000588410 ABCD1P33897 745 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 CLCNKBP51801 687 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 HERC4Q5GLZ8 1057 aaPredicted RBP21.38■■□□□ 1.01
TPM4-208ENST00000588410 PDXDC1Q6P996 788 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 CCDC73Q6ZRK6 1079 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 PALB2Q86YC2 1186 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 GLYCTKQ8IVS8 523 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 DDX27Q96GQ7 796 aaKnown RBP21.38■■□□□ 1.01
TPM4-208ENST00000588410 POMKQ9H5K3 350 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 TBX20Q9UMR3 447 aa21.38■■□□□ 1.01
TPM4-208ENST00000588410 NCOR1O75376 2440 aa21.37■■□□□ 1.01
TPM4-208ENST00000588410 HNRNPDLO14979 420 aaKnown RBP21.37■■□□□ 1.01
TPM4-208ENST00000588410 TRAPPC3O43617 180 aa21.37■■□□□ 1.01
TPM4-208ENST00000588410 NASPP49321 788 aaPredicted RBP21.37■■□□□ 1.01
TPM4-208ENST00000588410 MCL1Q07820 350 aa21.37■■□□□ 1.01
TPM4-208ENST00000588410 XKR4Q5GH76 650 aa21.37■■□□□ 1.01
TPM4-208ENST00000588410 RTP2Q5QGT7 225 aa21.37■■□□□ 1.01
TPM4-208ENST00000588410 FOXD4L5Q5VV16 416 aaPredicted RBP21.37■■□□□ 1.01
TPM4-208ENST00000588410 PRSS55Q6UWB4 352 aaPredicted RBP21.37■■□□□ 1.01
TPM4-208ENST00000588410 ALKAL1Q6UXT8 129 aa21.37■■□□□ 1.01
TPM4-208ENST00000588410 SV2BQ7L1I2 683 aa21.37■■□□□ 1.01
TPM4-208ENST00000588410 FOXD4L4Q8WXT5 416 aaPredicted RBP21.37■■□□□ 1.01
TPM4-208ENST00000588410 TMEM189-UBE2V1I3L0A0 370 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 C1RP00736 705 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 MYBP10242 640 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 KCNE1P15382 129 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 RPL17P18621 184 aaKnown RBP21.36■■□□□ 1.01
TPM4-208ENST00000588410 STAT6P42226 847 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 UPP1Q16831 310 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 SEZ6Q53EL9 994 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.36■■□□□ 1.01
TPM4-208ENST00000588410 DYMQ7RTS9 669 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms