RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 HDAC7Q8WUI4 952 aa20.66■□□□□ 0.9
TRIM47-205ENST00000587774 SMG7Q92540 1137 aaKnown RBP20.66■□□□□ 0.9
TRIM47-205ENST00000587774 ZNF707Q96C28 371 aaPredicted RBP20.66■□□□□ 0.9
TRIM47-205ENST00000587774 TMX3Q96JJ7 454 aa20.66■□□□□ 0.9
TRIM47-205ENST00000587774 PHOX2BQ99453 314 aa20.66■□□□□ 0.9
TRIM47-205ENST00000587774 PLEKHA4Q9H4M7 779 aa20.66■□□□□ 0.9
TRIM47-205ENST00000587774 WDR6Q9NNW5 1121 aaKnown RBP20.66■□□□□ 0.9
TRIM47-205ENST00000587774 DNM3Q9UQ16 869 aa20.66■□□□□ 0.9
TRIM47-205ENST00000587774 CCDC169A6NNP5 214 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 K7ERI5 159 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 PAPLNO95428 1278 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 C1RP00736 705 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 NPTX2P47972 431 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 MAPK7Q13164 816 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 LILRA6Q6PI73 481 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 CYP26C1Q6V0L0 522 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 CEP120Q8N960 986 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 TTPALQ9BTX7 342 aa20.65■□□□□ 0.9
TRIM47-205ENST00000587774 WDR87Q6ZQQ6 2873 aa20.64■□□□□ 0.9
TRIM47-205ENST00000587774 GJB2P29033 226 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 ATP2C1P98194 919 aaPredicted RBP20.64■□□□□ 0.89
TRIM47-205ENST00000587774 DMP1Q13316 513 aaPredicted RBP20.64■□□□□ 0.89
TRIM47-205ENST00000587774 PSMD5Q16401 504 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 RILPL1Q5EBL4 403 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 RINT1Q6NUQ1 792 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 TAS1R3Q7RTX0 852 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 CEP57Q86XR8 500 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 PIK3R5Q8WYR1 880 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 STAMQ92783 540 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 DRC1Q96MC2 740 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 PPP1R10Q96QC0 940 aaKnown RBP20.64■□□□□ 0.89
TRIM47-205ENST00000587774 CDT1Q9H211 546 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 KCNK12Q9HB15 430 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 ZDHHC7Q9NXF8 308 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 ARHGAP28Q9P2N2 729 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 TNFSF13BQ9Y275 285 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 FANCMQ8IYD8 2048 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 PATJQ8NI35 1801 aa20.64■□□□□ 0.89
TRIM47-205ENST00000587774 GBP2P32456 591 aaPredicted RBP20.63■□□□□ 0.89
TRIM47-205ENST00000587774 TDGQ13569 410 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 ZRSR1Q15695 479 aaKnown RBP20.63■□□□□ 0.89
TRIM47-205ENST00000587774 ZNF568Q3ZCX4 644 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 C1orf186Q6ZWK4 172 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 APBB1IPQ7Z5R6 666 aaPredicted RBP20.63■□□□□ 0.89
TRIM47-205ENST00000587774 LNX1Q8TBB1 728 aaPredicted RBP20.63■□□□□ 0.89
TRIM47-205ENST00000587774 ACO2Q99798 780 aaKnown RBP20.63■□□□□ 0.89
TRIM47-205ENST00000587774 CLSTN3Q9BQT9 956 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 NT5C3AQ9H0P0 336 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 PIDD1Q9HB75 910 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 GOLGA2P5Q9HBQ8 144 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 KMT5AQ9NQR1 393 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 FBXW11Q9UKB1 542 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 DUSP12Q9UNI6 340 aa20.63■□□□□ 0.89
TRIM47-205ENST00000587774 TMEM189-UBE2V1I3L0A0 370 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 IGFBP6P24592 240 aaPredicted RBP20.62■□□□□ 0.89
TRIM47-205ENST00000587774 CLCNKBP51801 687 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 ELAVL2Q12926 359 aaKnown RBP20.62■□□□□ 0.89
TRIM47-205ENST00000587774 HYIQ5T013 277 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 TMEM105Q8N8V8 129 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 PNMA5Q96PV4 448 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 MYADMQ96S97 322 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 MRPL4Q9BYD3 311 aaKnown RBP20.62■□□□□ 0.89
TRIM47-205ENST00000587774 PRKD2Q9BZL6 878 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 TMEM134Q9H6X4 195 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 PTPRHQ9HD43 1115 aa20.62■□□□□ 0.89
TRIM47-205ENST00000587774 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
TRIM47-205ENST00000587774 VWA3AA6NCI4 1184 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 H3BQV1 296 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 ADAM12O43184 909 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 ZMYND10O75800 440 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 GRM5P41594 1212 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 OSTNP61366 133 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 RAD51AP2Q09MP3 1159 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-205ENST00000587774 GET4Q7L5D6 327 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-205ENST00000587774 C3orf58Q8NDZ4 430 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 TARS2Q9BW92 718 aaKnown RBP20.61■□□□□ 0.89
TRIM47-205ENST00000587774 IGSF9Q9P2J2 1179 aa20.61■□□□□ 0.89
TRIM47-205ENST00000587774 SCN1AP35498 2009 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 SFI1A8K8P3 1242 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 SLC16A4O15374 487 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 B3GAT3O94766 335 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 PROZP22891 400 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 GUCY2CP25092 1073 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 SOX4Q06945 474 aaPredicted RBP20.6■□□□□ 0.89
TRIM47-205ENST00000587774 UPP1Q16831 310 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 CWF19L1Q69YN2 538 aaKnown RBP20.6■□□□□ 0.89
TRIM47-205ENST00000587774 RSAD2Q8WXG1 361 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 TIPINQ9BVW5 301 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 CCDC94Q9BW85 323 aaPredicted RBP20.6■□□□□ 0.89
TRIM47-205ENST00000587774 MFSD1Q9H3U5 465 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 C17orf75Q9HAS0 396 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 UPF2Q9HAU5 1272 aaKnown RBP20.6■□□□□ 0.89
TRIM47-205ENST00000587774 TOPORSQ9NS56 1045 aaPredicted RBP20.6■□□□□ 0.89
TRIM47-205ENST00000587774 FAM86C1Q9NVL1 165 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 EPS15L1Q9UBC2 864 aa20.6■□□□□ 0.89
TRIM47-205ENST00000587774 ZFHX2Q9C0A1 2572 aaPredicted RBP20.6■□□□□ 0.89
TRIM47-205ENST00000587774 TICRRQ7Z2Z1 1910 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 COL4A3Q01955 1670 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 SMIM28A0A1B0GU29 152 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms