RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FAM167AQ96KS9 214 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 B3GALT6Q96L58 329 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 NECTIN4Q96NY8 510 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 KLHL5Q96PQ7 755 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 KCNK17Q96T54 332 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 DNAJC25Q9H1X3 360 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 CBX8Q9HC52 389 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 NRBP2Q9NSY0 501 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 R4GN57 208 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 GVINP1Q7Z2Y8 2422 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 COL4A3Q01955 1670 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 KRBA1A5PL33 1030 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 EML1O00423 815 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 MARCH6O60337 910 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 RFPL2O75678 378 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 KLRC2P26717 231 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 CLCN4P51793 760 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 NPEPPSP55786 919 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 ANGPT1Q15389 498 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 CATSPER4Q7RTX7 472 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 MIER3Q7Z3K6 550 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 GPR149Q86SP6 731 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 GLYCTKQ8IVS8 523 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 C4orf32Q8N8J7 132 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 SLC5A5Q92911 643 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 NKD2Q969F2 451 aaPredicted RBP8.62□□□□□ -1.03
VMP1-204ENST00000587259 DHX58Q96C10 678 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 CDK5RAP3Q96JB5 506 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 MRPL9Q9BYD2 267 aaKnown RBP8.62□□□□□ -1.03
VMP1-204ENST00000587259 GCOM2Q9BZD3 368 aaPredicted RBP8.62□□□□□ -1.03
VMP1-204ENST00000587259 NT5C3AQ9H0P0 336 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 KCNK12Q9HB15 430 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 CYP26B1Q9NR63 512 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 FAM105AQ9NUU6 356 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 SUCLA2Q9P2R7 463 aaPredicted RBP8.62□□□□□ -1.03
VMP1-204ENST00000587259 WRAP73Q9P2S5 460 aaPredicted RBP8.62□□□□□ -1.03
VMP1-204ENST00000587259 CACNG4Q9UBN1 327 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 STK17AQ9UEE5 414 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 DDX25Q9UHL0 483 aaKnown RBP8.62□□□□□ -1.03
VMP1-204ENST00000587259 FBXL21Q9UKT6 434 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 CA14Q9ULX7 337 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 PRG3Q9Y2Y8 225 aaPredicted RBP8.62□□□□□ -1.03
VMP1-204ENST00000587259 C2orf16Q68DN1 1984 aa8.62□□□□□ -1.03
VMP1-204ENST00000587259 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 IGKV6-21A0A0C4DH24 114 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 PSMD10O75832 226 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 PTMAP06454 111 aaKnown RBP8.61□□□□□ -1.03
VMP1-204ENST00000587259 DCNP07585 359 aaKnown RBP8.61□□□□□ -1.03
VMP1-204ENST00000587259 AOC1P19801 751 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 CYP3A7P24462 503 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 CDC25BP30305 580 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 ID4P47928 161 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 MYL5Q02045 173 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 GRIN1Q05586 938 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 SPECC1Q5M775 1068 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 UBXN11Q5T124 520 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 RRAGBQ5VZM2 374 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 KRT79Q5XKE5 535 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 HAUS3Q68CZ6 603 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 GLB1LQ6UWU2 654 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 CCDC149Q6ZUS6 474 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 ANO5Q75V66 913 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 PDILTQ8N807 584 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 IGSF22Q8N9C0 903 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 DTWD2Q8NBA8 298 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 ERMNQ8TAM6 284 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 SPATA20Q8TB22 786 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 TMEM143Q96AN5 459 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 EPSTI1Q96J88 318 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 MYADMQ96S97 322 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 TEKT3Q9BXF9 490 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 IRF2BPLQ9H1B7 796 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 SFXN1Q9H9B4 322 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 IFT122Q9HBG6 1241 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 MAN1C1Q9NR34 630 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 DZANK1Q9NVP4 752 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 MARCH5Q9NX47 278 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 SERTAD1Q9UHV2 236 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 HES2Q9Y543 173 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 PCDHB2Q9Y5E7 798 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 DENND4AQ7Z401 1863 aa8.61□□□□□ -1.03
VMP1-204ENST00000587259 EP300Q09472 2414 aaPredicted RBP8.61□□□□□ -1.03
VMP1-204ENST00000587259 DMXL1Q9Y485 3027 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 CCDC195A0A1B0GUA6 201 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 MED19A0JLT2 244 aaPredicted RBP8.6□□□□□ -1.03
VMP1-204ENST00000587259 NRP1O14786 923 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 ZBTB39O15060 712 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 CBFA2T2O43439 604 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 SLC37A4O43826 429 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 LILRB3O75022 631 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 LRRN2O75325 713 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 ADCY5O95622 1261 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 SRGAP2CP0DJJ0 459 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 RPL17P18621 184 aaKnown RBP8.6□□□□□ -1.03
VMP1-204ENST00000587259 SFPQP23246 707 aaKnown RBP eCLIP8.6□□□□□ -1.03
VMP1-204ENST00000587259 MSNP26038 577 aaKnown RBP8.6□□□□□ -1.03
VMP1-204ENST00000587259 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
VMP1-204ENST00000587259 GBP2P32456 591 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms