RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
APOC1-201ENST00000586638 CDR2LQ86X02 465 aaPredicted RBP11.03□□□□□ -0.64
APOC1-201ENST00000586638 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 PARD3BQ8TEW8 1205 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 POP1Q99575 1024 aaKnown RBP11.03□□□□□ -0.64
APOC1-201ENST00000586638 ACO2Q99798 780 aaKnown RBP11.03□□□□□ -0.64
APOC1-201ENST00000586638 EDEM3Q9BZQ6 932 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 TMEM117Q9H0C3 514 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 UPF3AQ9H1J1 476 aaKnown RBP11.03□□□□□ -0.64
APOC1-201ENST00000586638 ZNF576Q9H609 170 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 ADGRG1Q9Y653 693 aa11.03□□□□□ -0.64
APOC1-201ENST00000586638 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
APOC1-201ENST00000586638 MOXD2PA6NHM9 499 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 RRN3P2A6NIE6 340 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ZNF233A6NK53 670 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ACKR2O00590 384 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ASAP2O43150 1006 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CCP110O43303 1012 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 LRRN2O75325 713 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 OFD1O75665 1012 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 TOM1L1O75674 476 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 NDUFA10O95299 355 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CCDC175P0C221 793 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 IQCF3P0C7M6 154 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CYP2C9P11712 490 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 TNNT1P13805 278 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 HNRNPH3P31942 346 aaKnown RBP11.02□□□□□ -0.65
APOC1-201ENST00000586638 GPC3P51654 580 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 GJA9P57773 515 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
APOC1-201ENST00000586638 TMEM62Q0P6H9 643 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 PRPF4BQ13523 1007 aaKnown RBP11.02□□□□□ -0.65
APOC1-201ENST00000586638 PSMD6Q15008 389 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ZNF568Q3ZCX4 644 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ATF7IP2Q5U623 682 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 MFSD5Q6N075 450 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CRELD2Q6UXH1 353 aaPredicted RBP11.02□□□□□ -0.65
APOC1-201ENST00000586638 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 ARHGEF19Q8IW93 802 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 KIAA0319LQ8IZA0 1049 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 KLHDC9Q8NEP7 349 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 NLRP7Q8WX94 980 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 TIFAQ96CG3 184 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CPB2Q96IY4 423 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 KATNAL1Q9BW62 490 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CDT1Q9H211 546 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 FZD8Q9H461 694 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 IFT122Q9HBG6 1241 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 PDE11AQ9HCR9 933 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
APOC1-201ENST00000586638 PRMT7Q9NVM4 692 aaPredicted RBP11.02□□□□□ -0.65
APOC1-201ENST00000586638 RBAKQ9NYW8 714 aaPredicted RBP11.02□□□□□ -0.65
APOC1-201ENST00000586638 ARHGAP20Q9P2F6 1191 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
APOC1-201ENST00000586638 PTPRJQ12913 1337 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 NRCAMQ92823 1304 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CNTNAP2Q9UHC6 1331 aa11.02□□□□□ -0.65
APOC1-201ENST00000586638 CITO14578 2027 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 C17orf102A2RUQ5 167 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 MBLAC1A4D2B0 266 aaPredicted RBP11.01□□□□□ -0.65
APOC1-201ENST00000586638 P4HA2O15460 535 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 ZEB2O60315 1214 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 FAM189A1O60320 539 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 FGFR4P22455 802 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 CYLC1P35663 651 aaPredicted RBP11.01□□□□□ -0.65
APOC1-201ENST00000586638 EIF4A3P38919 411 aaKnown RBP11.01□□□□□ -0.65
APOC1-201ENST00000586638 CDK7P50613 346 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 JAM2P57087 298 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 CDK17Q00537 523 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 MCL1Q07820 350 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 PPIGQ13427 754 aaKnown RBP eCLIP11.01□□□□□ -0.65
APOC1-201ENST00000586638 ENOX2Q16206 610 aaKnown RBP11.01□□□□□ -0.65
APOC1-201ENST00000586638 AMHR2Q16671 573 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 CCSAPQ6IQ19 270 aaPredicted RBP11.01□□□□□ -0.65
APOC1-201ENST00000586638 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
APOC1-201ENST00000586638 BRSK2Q8IWQ3 736 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 CEP120Q8N960 986 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 USP38Q8NB14 1042 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 LMO3Q8TAP4 145 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 PPM1EQ8WY54 764 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 SEMA4DQ92854 862 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 GLT1D1Q96MS3 346 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 CGRRF1Q99675 332 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.01□□□□□ -0.659e-7■□□□□ 9.7
APOC1-201ENST00000586638 NFKBIZQ9BYH8 718 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 PDZD7Q9H5P4 517 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 NHEJ1Q9H9Q4 299 aaPredicted RBP11.01□□□□□ -0.65
APOC1-201ENST00000586638 SPC25Q9HBM1 224 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 KIAA1586Q9HCI6 787 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 TMEM8AQ9HCN3 771 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 HDAC6Q9UBN7 1215 aa11.01□□□□□ -0.65
APOC1-201ENST00000586638 DNAJC12Q9UKB3 198 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms