RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 PTPN14Q15678 1187 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 SMAD2Q15796 467 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 USP41Q3LFD5 358 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 SLFN12LQ6IEE8 588 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 KIAA1841Q6NSI8 718 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 FUT10Q6P4F1 479 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 MAP4K3Q8IVH8 894 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 SNX27Q96L92 541 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 PPP1R10Q96QC0 940 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 FIZ1Q96SL8 496 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 VN1R3Q9BXE9 311 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 OLFML3Q9NRN5 406 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 FAM13BQ9NYF5 915 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 CLEC1BQ9P126 229 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 ANKFY1Q9P2R3 1169 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 DPP7Q9UHL4 492 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 EXOC7Q9UPT5 735 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
SMARCA4-209ENST00000586122 MTCL1Q9Y4B5 1905 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 BDP1A6H8Y1 2624 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 FRMD3A2A2Y4 597 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 CLASP2O75122 1294 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 TADA2AO75478 443 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 ADH1AP07327 375 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 CLTAP09496 248 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 IL9P15248 144 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 CA8P35219 290 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 MATR3P43243 847 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 KRT85P78386 507 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 DSG1Q02413 1049 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 PKP1Q13835 747 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 NAB2Q15742 525 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 AXDND1Q5T1B0 1012 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 FOXD4L5Q5VV16 416 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 ANKRD54Q6NXT1 300 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 ALKAL1Q6UXT8 129 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 STXBP4Q6ZWJ1 553 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 DYMQ7RTS9 669 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 CCDC65Q8IXS2 484 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 SPRYD3Q8NCJ5 442 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 DNAJC19Q96DA6 116 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 CHST7Q9NS84 486 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 KBTBD4Q9NVX7 518 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 CNTN3Q9P232 1028 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 RCOR1Q9UKL0 485 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 BARX2Q9UMQ3 279 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 HCFC2Q9Y5Z7 792 aa11.37□□□□□ -0.59
SMARCA4-209ENST00000586122 A0A087X0B3 334 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 SMIM28A0A1B0GU29 152 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 CASTOR2A6NHX0 329 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 MYMKA6NI61 221 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 OGTO15294 1046 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 XPOTO43592 962 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 TRAPPC3O43617 180 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 LILRB3O75022 631 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 PPP1R37O75864 691 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 DNM1Q05193 864 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 ITIH3Q06033 890 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 POSTNQ15063 836 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 E2F4Q16254 413 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 KIAA0319Q5VV43 1072 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 CES5AQ6NT32 575 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 CNNM4Q6P4Q7 775 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 DCLRE1AQ6PJP8 1040 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 SHC4Q6S5L8 630 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 ZNF720Q7Z2F6 126 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 SFR1Q86XK3 245 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 ADHFE1Q8IWW8 467 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 CD302Q8IX05 232 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 PDILTQ8N807 584 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 CEP120Q8N960 986 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 VN1R2Q8NFZ6 395 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 NECTIN4Q96NY8 510 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 KLHL5Q96PQ7 755 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 SCAND2PQ9GZW5 306 aaPredicted RBP11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 MRPL44Q9H9J2 332 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 RXFP1Q9HBX9 757 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 FNIP2Q9P278 1114 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 PCDHA7Q9UN72 937 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 PCDHB13Q9Y5F0 798 aa11.36□□□□□ -0.59
SMARCA4-209ENST00000586122 A0A0B4J269 797 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 B3GAT3O94766 335 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 KIF4AO95239 1232 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 CNPP09543 421 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 HARSP12081 509 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 IDEP14735 1019 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 PAX3P23760 479 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 KLRC2P26717 231 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 NMT1P30419 496 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 OSTNP61366 133 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 ZP2Q05996 745 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 PPP2R3AQ06190 1150 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms