RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GVINP1Q7Z2Y8 2422 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 FANCMQ8IYD8 2048 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 I3L4J1 428 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 THP07101 528 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 C8AP07357 584 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 RFX1P22670 979 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 PRPF4BQ13523 1007 aaKnown RBP12.84□□□□□ -0.35
LIG3-207ENST00000586119 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
LIG3-207ENST00000586119 PSMD5Q16401 504 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 FAM187BQ17R55 369 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 GLRA4Q5JXX5 417 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 DCLRE1AQ6PJP8 1040 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 PADI6Q6TGC4 694 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 KCNG4Q8TDN1 519 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 NXPE3Q969Y0 559 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 CCDC113Q9H0I3 377 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 GOLGA2P5Q9HBQ8 144 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 ARHGEF3Q9NR81 526 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 POLIQ9UNA4 740 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 SIT1Q9Y3P8 196 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 SF3B1O75533 1304 aaKnown RBP eCLIP12.84□□□□□ -0.353e-9■■■■■ 206.8
LIG3-207ENST00000586119 MIA3Q5JRA6 1907 aa12.84□□□□□ -0.35
LIG3-207ENST00000586119 SEC24BO95487 1268 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 PRKCBP05771 671 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 CYP11B2P19099 503 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 CD72P21854 359 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 OR1D2P34982 312 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 ID4P47928 161 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 ANKRD1Q15327 319 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 PPM1LQ5SGD2 360 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 ZBTB8OSQ8IWT0 167 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 GPR65Q8IYL9 337 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 MAML2Q8IZL2 1156 aaPredicted RBP12.83□□□□□ -0.36
LIG3-207ENST00000586119 DCLK2Q8N568 766 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 FGF13Q92913 245 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 NACC1Q96RE7 527 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 PLA2G2FQ9BZM2 168 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 SLC2A4RGQ9NR83 387 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
LIG3-207ENST00000586119 CDH7Q9ULB5 785 aa12.83□□□□□ -0.36
LIG3-207ENST00000586119 ACKR2O00590 384 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
LIG3-207ENST00000586119 N4BP3O15049 544 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 C1RP00736 705 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 SP9P0CG40 484 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 BRCC3P46736 316 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 CLCNKBP51801 687 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 NEK4P51957 841 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 ANAPC15P60006 121 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 SOX4Q06945 474 aaPredicted RBP12.82□□□□□ -0.36
LIG3-207ENST00000586119 NBR1Q14596 966 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 MAPK6Q16659 721 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 AXDND1Q5T1B0 1012 aaPredicted RBP12.82□□□□□ -0.36
LIG3-207ENST00000586119 TMEM130Q8N3G9 435 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 CEP120Q8N960 986 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 C3orf58Q8NDZ4 430 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 MCPH1Q8NEM0 835 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 DEPTORQ8TB45 409 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 KXD1Q9BQD3 176 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 POLR3CQ9BUI4 534 aaPredicted RBP12.82□□□□□ -0.36
LIG3-207ENST00000586119 WDR87Q6ZQQ6 2873 aa12.82□□□□□ -0.36
LIG3-207ENST00000586119 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 B3GAT3O94766 335 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 LMNAP02545 664 aaKnown RBP12.81□□□□□ -0.36
LIG3-207ENST00000586119 FGFR3P22607 806 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 RPA1P27694 616 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
LIG3-207ENST00000586119 STARD6P59095 220 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 RAB33AQ14088 237 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 TRIM29Q14134 588 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 C1orf210Q8IVY1 113 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 KIAA2013Q8IYS2 634 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 C4orf32Q8N8J7 132 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 PPP1R10Q96QC0 940 aaKnown RBP12.81□□□□□ -0.36
LIG3-207ENST00000586119 CDY1Q9Y6F8 540 aa12.81□□□□□ -0.36
LIG3-207ENST00000586119 HNRNPA1P09651 372 aaKnown RBP eCLIP12.8□□□□□ -0.36
LIG3-207ENST00000586119 OR52Z1P0C646 297 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 NAMPTP43490 491 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 OSTNP61366 133 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 CREMQ03060 361 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 SLC5A9Q2M3M2 681 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 LIN9Q5TKA1 542 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 CCDC83Q8IWF9 413 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 PJA1Q8NG27 643 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 RMDN1Q96DB5 314 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 DDX27Q96GQ7 796 aaKnown RBP12.8□□□□□ -0.36
LIG3-207ENST00000586119 ZMAT2Q96NC0 199 aaKnown RBP12.8□□□□□ -0.36
LIG3-207ENST00000586119 C2orf40Q9H1Z8 148 aa12.8□□□□□ -0.36
LIG3-207ENST00000586119 MTRRQ9UBK8 725 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms