RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 THP07101 528 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 IL9P15248 144 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 ABCD1P33897 745 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 STAT6P42226 847 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 RBM10P98175 930 aaKnown RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 STRN3Q13033 797 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 SMAD4Q13485 552 aaKnown RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 SMAD2Q15796 467 aaKnown RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 RRAGBQ5VZM2 374 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 SLC39A4Q6P5W5 647 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 RBM23Q86U06 439 aaKnown RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 SFR1Q86XK3 245 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 FAM178BQ8IXR5 827 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 MICAL1Q8TDZ2 1067 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 DDX12PQ92771 950 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 HVCN1Q96D96 273 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 ZBTB45Q96K62 511 aaPredicted RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 SNX27Q96L92 541 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 NECAB3Q96P71 396 aaPredicted RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 UHRF1Q96T88 793 aaPredicted RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 PAAF1Q9BRP4 392 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 CUEDC2Q9H467 287 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 OLFML3Q9NRN5 406 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 CHST7Q9NS84 486 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 KBTBD4Q9NVX7 518 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 CNTN3Q9P232 1028 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 SEL1LQ9UBV2 794 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 RCOR1Q9UKL0 485 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 ADAM28Q9UKQ2 775 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 CFAP45Q9UL16 551 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 BARX2Q9UMQ3 279 aaPredicted RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 TBX20Q9UMR3 447 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 GDAQ9Y2T3 454 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 PRG3Q9Y2Y8 225 aaPredicted RBP9.45□□□□□ -0.9
ATG4D-202ENST00000585437 HCFC2Q9Y5Z7 792 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 SCN1AP35498 2009 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 CLASP2O75122 1294 aaKnown RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 KIF4AO95239 1232 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 KRT18P05783 430 aaKnown RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 KCNE1P15382 129 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 GAP43P17677 238 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 NMT1P30419 496 aaKnown RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 OR1G1P47890 313 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 NDUFV1P49821 464 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 DSG1Q02413 1049 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 DNM1Q05193 864 aaKnown RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 HSP90AA2PQ14568 343 aaPredicted RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 CCDC183Q5T5S1 534 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 KIAA0319Q5VV43 1072 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 RESP18Q5W5W9 173 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 FUT10Q6P4F1 479 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 CNNM4Q6P4Q7 775 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 LRSAM1Q6UWE0 723 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 SV2BQ7L1I2 683 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 MYCT1Q8N699 235 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 SLC22A17Q8WUG5 538 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 AUTS2Q8WXX7 1259 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 SUSD6Q92537 303 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 CCDC94Q9BW85 323 aaPredicted RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 COLEC11Q9BWP8 271 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 TNMDQ9H2S6 317 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 IGFLR1Q9H665 355 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 RXFP1Q9HBX9 757 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 TOPORSQ9NS56 1045 aaPredicted RBP9.44□□□□□ -0.9
ATG4D-202ENST00000585437 ANKFY1Q9P2R3 1169 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 CACNG4Q9UBN1 327 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 PRKAG3Q9UGI9 489 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 CD207Q9UJ71 328 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 PCDHA7Q9UN72 937 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 STYXL1Q9Y6J8 313 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 DOCK8Q8NF50 2099 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 TRIOO75962 3097 aa9.44□□□□□ -0.9
ATG4D-202ENST00000585437 SF3B1O75533 1304 aaKnown RBP eCLIP9.43□□□□□ -0.9
ATG4D-202ENST00000585437 A0A0B4J269 797 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 SMIM28A0A1B0GU29 152 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 TTC26A0AVF1 554 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 GOLGA6L4A6NEF3 574 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 CASTOR2A6NHX0 329 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 TNFRSF10AO00220 468 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 HNRNPDLO14979 420 aaKnown RBP9.43□□□□□ -0.9
ATG4D-202ENST00000585437 CLDN3O15551 220 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 NR1I2O75469 434 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 PAPLNO95428 1278 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 CXCL14O95715 111 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 C1RP00736 705 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 URODP06132 367 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 ADRB2P07550 413 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 SRGAP2BP0DMP2 458 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 GLUD2P49448 558 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 ZP2Q05996 745 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 BMS1Q14692 1282 aaKnown RBP9.43□□□□□ -0.9
ATG4D-202ENST00000585437 UPP1Q16831 310 aa9.43□□□□□ -0.9
ATG4D-202ENST00000585437 FOXD4L6Q3SYB3 417 aaPredicted RBP9.43□□□□□ -0.9
ATG4D-202ENST00000585437 ZC2HC1CQ53FD0 456 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms